Resource Type:
Polypeptide
Name:
XM_017364639.1
Identifier:
XM_017364639.1-protein
Sequence:
MDGAAASGGAGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFA
RLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKN
IHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQ
PTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDL
SAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLEL
SPAVSDINLVSHSTQSSSEGGESPQRVSEGGIKDALMRSVSTVYAPETLE
LSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQ
LNLTLASSSLHANESHYSAKLAQDSEKSLVSRSIGSGNEVEFRVPQKSKN
YSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQAS
PSARPNLHDEQEGRRQGNQNSRSTVDSLTL
Sequence Length:
480
Sequence Checksum:
f31a51bace11798e0f45e785d564fd97
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017364639.1, derives from mRNA, XM_017364639.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ACN4 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0
Identity = 332/489 (67.89%), Postives = 380/489 (77.71%), Query Frame = 0
Match: A0A5J5ACN4 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0
Identity = 332/489 (67.89%), Postives = 380/489 (77.71%), Query Frame = 0
Query: 1 MDG-AAASGG--AGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQ-RVSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSA---KLAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRRQGNQNSRS--TVDSLTL 480
MDG + A GG GPAPFLLKTYDM+ED STD+IVSWSSS+NSFVVWNPPEFAR+LLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFV+DQKHLLKNIHRRKPIHSHS+P S+ DPERAAF+EEI+K+SREK LE N+L KQQQ AKLQLE+LTQR+GGME+RQE LL+FLEK +QN FVEHLARKLES+D SAYNKKRRLP V+ SQ + E+ FVDNHS RPEFGNIFHQDFSNKL LELSPAVSD+ LVSHST SS+E G SP R+ EG KDA MR V+APETLELSDTGTSF F MD SL+ + G + SP+L SLQQ L+S+EEG+G ISC LNLTLASS L N HYSA +L Q+ KS +S + E +F V K++ +S D LSS + NQ P TA RVNDVFWEQFLTERPG+S+ E+AS + R N D QE RR G+ SR+ V+ LTL
Sbjct: 1 MDGPSVAVGGVSGGPAPFLLKTYDMIEDSSTDKIVSWSSSKNSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHLLKNIHRRKPIHSHSHPQGSSADPERAAFDEEIEKLSREKAALEANVLSFKQQQSAAKLQLEDLTQRVGGMEQRQEKLLSFLEKAIQNRSFVEHLARKLESMDFSAYNKKRRLPQVDHSQPVPENGFVDNHSSFRPEFGNIFHQDFSNKLRLELSPAVSDVILVSHSTLSSNEDGGSPHMRIKEGYTKDAHMRISGLVFAPETLELSDTGTSFRFKMDSSLSCRAG--ANESPRLHSLQQSLTSNEEGDG-ISCHLNLTLASSPLQVNRGHYSAGMSQLGQEIGKSPEPKSNANIKEADFIVSPKNRTFSDDDTTLSSSQEAPINNQGPATAQGRVNDVFWEQFLTERPGSSDNEEASSNFRENPSDGQEDRRSGHGMSRNRKNVEHLTL 486
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AL01 ((Putative heat stress transcription factor A-5 {ECO:0000313|EMBL:MPA56775.1}))
HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 324/486 (66.67%), Postives = 379/486 (77.98%), Query Frame = 0
Match: A0A5B7AL01 ((Putative heat stress transcription factor A-5 {ECO:0000313|EMBL:MPA56775.1}))
HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0
Identity = 324/486 (66.67%), Postives = 379/486 (77.98%), Query Frame = 0
Query: 1 MDGAAASGGAGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQRV-SEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAK---LAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRR--QGNQNSRSTVDSLTL 480
MDGA ++GG GPAPFLLKTYDMV+D STD+IVSWSS++NSFVVWNPPEFAR+LLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANE+F++DQKHLL NIHRRKPIHSHS+P S+VDPERAAFEEEIDK+SREK LE N+LR KQQQ AKLQLE+L QR GGME++QE LL F EK +QN FVEHL++KLES+D SAYNKKRRLP VE SQ + E+ FVDNH+ SRP+FGN FHQD SNKL LELSPAVSD+NLVS+STQSS+E G SPQR+ SEG D MR+ ++APETLELSDTGTSFT MD SL+ + G S SP+L SLQQ L+S+EEG+G ISC LNLTLASS L +SHYSA+ L Q+ KS +S + + +F V K++ +S D LSS + NQ P TA RVNDVFWEQFLTERPGTSE E+AS + R +DEQE R +G + V+ LTL
Sbjct: 1 MDGAPSAGG-GPAPFLLKTYDMVDDSSTDDIVSWSSNKNSFVVWNPPEFARILLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFMKDQKHLLINIHRRKPIHSHSHPQGSSVDPERAAFEEEIDKLSREKAALEENVLRFKQQQSAAKLQLEDLNQRAGGMEQKQEKLLTFFEKAIQNRSFVEHLSQKLESMDFSAYNKKRRLPQVEHSQAVPENGFVDNHNSSRPDFGNFFHQDISNKLRLELSPAVSDVNLVSYSTQSSNEDGGSPQRILSEGYQNDTQMRTGGFLFAPETLELSDTGTSFTLKMDSSLSSRAG--ASESPRLHSLQQSLTSNEEGDG-ISCHLNLTLASSPLQVEKSHYSARMPQLGQEIGKSSELKSNANIKDADFIVSPKNRTFSDDDTTLSSSQEAPINNQGPATAQVRVNDVFWEQFLTERPGTSENEEASSNLRSTPYDEQEDSRSSRGMSGNTKNVEHLTL 482
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BYU4 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0
Identity = 313/469 (66.74%), Postives = 372/469 (79.32%), Query Frame = 0
Match: A0A5J5BYU4 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0
Identity = 313/469 (66.74%), Postives = 372/469 (79.32%), Query Frame = 0
Query: 1 MDGAAASGGAGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQR-VSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAK---LAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRR 465
MDGA+++GG GPAPFLLKTY+MV+D STD+IVSWS + +SFVVWNPPEFAR+LLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANE+F++DQKHLL NIHRRKPIHSHS+P S+VDPERAAF+EEIDK+SREK LE N++R KQQQ AKLQLE+LTQR GG+E++Q+ LL F EK +QN FVEHLA+KLES+D SAYNKKRRLP V+ SQ + E+SFVD+ S SR +FGNIFHQD SN+LTLELSPAVSD+N VS STQSS E G SPQR +SEG DA M + V+APETLELSDTGTSFT MDP L+ + G S +P+LQSLQQ L+S+EEG+G ISC LNLTLASS L ++SHYSA+ L Q+ KS +S + + +F V K++ +S D LSS KNQ P TA RVNDVFWEQFLTERPG+SE E+AS + + N + EQE RR
Sbjct: 27 MDGASSAGG-GPAPFLLKTYEMVDDSSTDDIVSWSDNNSSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFLKDQKHLLTNIHRRKPIHSHSHPQGSSVDPERAAFDEEIDKLSREKAALEANVIRFKQQQSAAKLQLEDLTQRTGGLEQKQQKLLTFFEKAIQNRSFVEHLAQKLESMDFSAYNKKRRLPQVDHSQPVPENSFVDDRSSSRHDFGNIFHQDISNELTLELSPAVSDVNFVSQSTQSSIEDGGSPQRKLSEGYQNDARMGTGGFVFAPETLELSDTGTSFTLKMDPLLSCRPG--ASENPRLQSLQQSLTSNEEGDG-ISCHLNLTLASSPLQVDKSHYSARMPQLGQEIGKSPDLKSNANIKDADFIVSPKNRTFSDDNTTLSSSQGAPIKNQGPATAQVRVNDVFWEQFLTERPGSSENEEASSNFKANPYSEQEDRR 491
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4F280 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0
Identity = 313/464 (67.46%), Postives = 362/464 (78.02%), Query Frame = 0
Match: A0A4S4F280 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0
Identity = 313/464 (67.46%), Postives = 362/464 (78.02%), Query Frame = 0
Query: 5 AASGGAGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQ-RVSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAK--LAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPP-RVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGR 464
ASGG GPAPFLLKTYDMV+D +TDEIVSWSS+ NSFVVWNPPEFAR+LLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFV+DQKHLLKNIHRRKPIHSHS+P + VD ERAAFEEEIDK+SREK LE AKLQLE+ TQR+ GME+RQ+ LL +LE +QN FVEHLARKLE++D SAYNKKRRLP V+ SQ + E+SFVDNHS SRPEFG++FHQDFSNKL LELSP+VSDINLVSHSTQSS+E G SPQ R+SEG KDA MR+ +AP+TLELSDTGTSF F MD +L++K GS SP+LQSLQQ L+S+EEG+GHISC LNLTLASS + S SA+ L + KS RS +G +FRV ++ +S D A LSS + K Q P PP RVND+FWEQFLTERPG S+TE+AS S R N +D+Q+ R
Sbjct: 3 VASGG-GPAPFLLKTYDMVDDSNTDEIVSWSSNNNSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHLLKNIHRRKPIHSHSHPHGTPVDQERAAFEEEIDKLSREKVALEKAACEKAALLSAAKLQLEDSTQRVNGMEQRQDKLLNYLETAIQNQNFVEHLARKLEAMDFSAYNKKRRLPQVDYSQPVPENSFVDNHSSSRPEFGHVFHQDFSNKLRLELSPSVSDINLVSHSTQSSNEDGGSPQRRLSEGYPKDAQMRAGGLPFAPKTLELSDTGTSFMFMMDSTLSRK---GGSGSPRLQSLQQNLTSNEEGDGHISCHLNLTLASSLSQVDNSQSSARIQLGHEIGKSPELRSNVNGKVTDFRVSPSNRAFSDDDATLSSSQEAPIKIQGPPAPPPARVNDMFWEQFLTERPGASDTEEASSSFRANPYDDQKDR 462
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GNA9 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0
Identity = 313/464 (67.46%), Postives = 362/464 (78.02%), Query Frame = 0
Match: A0A7J7GNA9 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0
Identity = 313/464 (67.46%), Postives = 362/464 (78.02%), Query Frame = 0
Query: 5 AASGGAGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQ-RVSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAK--LAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPP-RVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGR 464
ASGG GPAPFLLKTYDMV+D +TDEIVSWSS+ NSFVVWNPPEFAR+LLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFV+DQKHLLKNIHRRKPIHSHS+P + VD ERAAFEEEIDK+SREK LE AKLQLE+ TQR+ GME+RQ+ LL +LE +QN FVEHLARKLE++D SAYNKKRRLP V+ SQ + E+SFVDNHS SRPEFG++FHQDFSNKL LELSP+VSDINLVSHSTQSS+E G SPQ R+SEG KDA MR+ +AP+TLELSDTGTSF F MD +L++K GS SP+LQSLQQ L+S+EEG+GHISC LNLTLASS + S SA+ L + KS RS +G +FRV ++ +S D A LSS + K Q P PP RVND+FWEQFLTERPG S+TE+AS S R N +D+Q+ R
Sbjct: 3 VASGG-GPAPFLLKTYDMVDDSNTDEIVSWSSNNNSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHLLKNIHRRKPIHSHSHPHGTPVDQERAAFEEEIDKLSREKVALEKAACEKAALLSAAKLQLEDSTQRVNGMEQRQDKLLNYLETAIQNQNFVEHLARKLEAMDFSAYNKKRRLPQVDYSQPVPENSFVDNHSSSRPEFGHVFHQDFSNKLRLELSPSVSDINLVSHSTQSSNEDGGSPQRRLSEGYPKDAQMRAGGLPFAPKTLELSDTGTSFMFMMDSTLSRK---GGSGSPRLQSLQQNLTSNEEGDGHISCHLNLTLASSLSQVDNSQSSARIQLGHEIGKSPELRSNVNGKVTDFRVSPSNRAFSDDDATLSSSQEAPIKIQGPPAPPPARVNDMFWEQFLTERPGASDTEEASSSFRANPYDDQKDR 462
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RS00 ((Heat stress transcription factor A-5 like {ECO:0000313|EMBL:PSS32793.1}))
HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0
Identity = 327/483 (67.70%), Postives = 371/483 (76.81%), Query Frame = 0
Match: A0A2R6RS00 ((Heat stress transcription factor A-5 like {ECO:0000313|EMBL:PSS32793.1}))
HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0
Identity = 327/483 (67.70%), Postives = 371/483 (76.81%), Query Frame = 0
Query: 1 MDGAAASGGAGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQ-RVSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAKLAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRRQGNQNSRS--TVDSLTL 480
MDG A GG GPAPFLLKTYDMV+D STDEIVSWSSS+NSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANE+F++DQKHLLKNIHRRKPIHSHS P S DPERAAFEEEIDK+SREKTTLE NLLR KQQ AK QLE+ TQR+ ME+RQE+LL+FLEK VQN FVE L+RKLES+D SAYNKKRRLP V+ S + E+SFVDN S SRP+FG FHQDFS+KL LELSPA SDIN VSHSTQSS+E G SPQ R+ EG KDA R+ +APETLELSDTGTSFTFNMD +L K G GS SP+LQSLQQ L+S+EE +GHISCQLNLTLASSSL ++S YSAK+ IG +E+ + + D LSS + K QEP T RVNDVFWEQFLTERPGTS+ E+AS S R N +D+Q+ R+ G SR+ ++ LTL
Sbjct: 1 MDGTPAGGGGGPAPFLLKTYDMVDDSSTDEIVSWSSSKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFLKDQKHLLKNIHRRKPIHSHSQPQGSAADPERAAFEEEIDKLSREKTTLENNLLRFKQQS-AAKPQLEDWTQRVTAMEQRQESLLSFLEKAVQNQNFVEQLSRKLESMDFSAYNKKRRLPQVDYSPQVPENSFVDNQSSSRPDFGIFFHQDFSDKLRLELSPADSDINFVSHSTQSSNEDGGSPQRRLLEGYPKDA-QRAGGLSFAPETLELSDTGTSFTFNMDSALLHKAG--GSESPRLQSLQQNLTSNEEVDGHISCQLNLTLASSSLQVDKSQYSAKVPPQQ-----GHDIGKSSELR----SNANDTEDDDGTLSSSQEAPVKKQEPATPQVRVNDVFWEQFLTERPGTSDAEEASSSFRANAYDDQDDRQSGRAVSRNGKNMEHLTL 470
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0U3TZ73 ((Transcription factor HsfA5a {ECO:0000313|EMBL:ALV82481.1}))
HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0
Identity = 302/473 (63.85%), Postives = 373/473 (78.86%), Query Frame = 0
Match: A0A0U3TZ73 ((Transcription factor HsfA5a {ECO:0000313|EMBL:ALV82481.1}))
HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0
Identity = 302/473 (63.85%), Postives = 373/473 (78.86%), Query Frame = 0
Query: 14 PFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQ-RVSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYS--AKLAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRRQGNQ---NSRSTVDSLTL 480
PFLLKTY+MV+D STDEIVSWSS+++SFVVWNPPEFAR+LLP YFKHNNFSSFIRQLNTYGFRK DPERWEFANEDFV+DQKHLLKNIHRRKPIHSHS+P D ERAAF+EEI+++SREKT L+ + ++KQQQ +AKLQLE+LTQR+ GME+RQE LL FLEK VQNP FV+HLA+K+ES+D +AYNKKRRLP V+ Q + E+S +DN+S SRPE G+IFH+DFSNKL LELSPA SDINL+S STQS +E SP ++SEG K+ MR+ ++APETLELSDTGTSFTF DP+L+Q++G+ + S +L LQ+ L+S+EEG+GHISC LNLTLASS L ++S + ++ QD KS SRSI E +FR KS+N+++D LSS + N+ P TAP RVNDVFWEQFLTERPG+S+TE+AS + R N +DEQE RR G NS+S ++ LTL
Sbjct: 20 PFLLKTYEMVDDSSTDEIVSWSSTKSSFVVWNPPEFARVLLPMYFKHNNFSSFIRQLNTYGFRKSDPERWEFANEDFVKDQKHLLKNIHRRKPIHSHSHPQGPPADSERAAFDEEIERLSREKTELQLKVYKVKQQQ-SAKLQLEDLTQRVSGMEQRQEKLLTFLEKAVQNPTFVKHLAQKIESMDFAAYNKKRRLPQVDHLQPVAENSLLDNYSSSRPECGSIFHKDFSNKLKLELSPAASDINLLSQSTQSPNEDAGSPHMKISEGDPKEMPMRTEGHLFAPETLELSDTGTSFTFKRDPTLSQQMGV--NESQRLLCLQESLTSTEEGDGHISCHLNLTLASSPLQVDKSSSTRMPQIGQDIGKSSASRSIADAKEADFRAIHKSRNFANDDTILSSSQGASVANEAPPTAPVRVNDVFWEQFLTERPGSSDTEEASSNFRSNPYDEQEDRRAGQGMLVNSKS-MEHLTL 488
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5C7ITP0 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0
Identity = 300/475 (63.16%), Postives = 368/475 (77.47%), Query Frame = 0
Match: A0A5C7ITP0 (HSF_DOMAIN domain-containing protein {ECO:0000259|PROSITE:PS00434})
HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0
Identity = 300/475 (63.16%), Postives = 368/475 (77.47%), Query Frame = 0
Query: 12 PAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQR-VSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAKLAQDSEKSLVSRSI---GSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRRQGNQNSRS--TVDSLTL 480
PAPFLLKTYDMV+D +TDEIVSWSS++NSFVVWNPPEFAR+LLPTYFKHNNFSSFIRQLNTYGFRKIDPE+WEF+NE+FV+DQKHLLKNIHRRKPIHSHS+P S VD ERAAFEE+ID++SREK LE N+L +KQQ+ AKL LE++TQR+ ME+RQENLL FLEK +QNP FVEHLARK+ES+D SAYNKKRRLP V+ S+ + E S DN+S SR +FGNIFHQDFSNKL LELSPAVSDIN+VSHSTQSS+E G SP R +S G KDA R+ ++ PET +L+DTGTSFTF MD S KV ++SP + SLQQ L+S+EE +G++SC LNLTLASSSL ++ S+ + Q + ++ +R + + + R KSKN ++ A LSS + N EP AP RVNDVFWEQFLTERPG+S+ E+AS S R N ++EQE RR G+ R+ +++ LTL
Sbjct: 19 PAPFLLKTYDMVDDSTTDEIVSWSSNKNSFVVWNPPEFARVLLPTYFKHNNFSSFIRQLNTYGFRKIDPEKWEFSNEEFVKDQKHLLKNIHRRKPIHSHSHPQGSLVDTERAAFEEQIDRLSREKAALEANILGVKQQRSAAKLHLEDMTQRVDSMEQRQENLLNFLEKFIQNPSFVEHLARKIESMDFSAYNKKRRLPQVDHSRTVLESSHFDNNSSSRLDFGNIFHQDFSNKLRLELSPAVSDINVVSHSTQSSNEDGGSPLRKISNGDRKDAHTRTEGNLFVPETFDLADTGTSFTFKMDSSFPHKV--PTNDSPSVHSLQQRLTSNEEVDGNVSCHLNLTLASSSLQFSKGISSSSMPQPNHDTVKARELRYKSDDKDCDTRSFPKSKNLENESATLSSSQEAPNNNSEPSAAPVRVNDVFWEQFLTERPGSSDNEEASSSYRANPYEEQEDRRAGHGMPRNAKSMEQLTL 491
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RXQ3 ((Heat stress transcription factor A-5 like {ECO:0000313|EMBL:PSS34814.1}))
HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0
Identity = 312/469 (66.52%), Postives = 360/469 (76.76%), Query Frame = 0
Match: A0A2R6RXQ3 ((Heat stress transcription factor A-5 like {ECO:0000313|EMBL:PSS34814.1}))
HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0
Identity = 312/469 (66.52%), Postives = 360/469 (76.76%), Query Frame = 0
Query: 15 FLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQ-RVSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAKLAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRRQGNQNSRS--TVDSLTL 480
FLLKTY+MV+D STDEIVSWSSS+NSFVVWNPPEFAR+LLP YFKHNNFSSFIRQLNTYGFRKIDPERWEFANE+FV+DQKHLLKNIHRRKPIHSHS P S DPERAAFEEEIDK+SREKTTLE NLLR KQQ AK QLE+ TQR+ +E RQE+LL+FLEKVVQN FVE L+RKLES+D SAYNKKRRL V+ SQ + E+SFVDN SRP+FGNIF QDFSNKL LELSP+VSDIN VSHSTQSS+E G SPQ R+SEG KDA R+ +A ETLELSDTGTSFTFNMD +L+ K G GS +P+L LQQ L+S+EE +GH+SC LNLTLASSSL ++S YSAK+ Q S + +S + S + + D LSS + KNQ P T+ RVNDVFWEQFLTERPG S+ E+AS S R N +D+QE R+ G SR+ + LTL
Sbjct: 14 FLLKTYEMVDDSSTDEIVSWSSSKNSFVVWNPPEFARILLPAYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFVKDQKHLLKNIHRRKPIHSHSQPQGSAADPERAAFEEEIDKLSREKTTLENNLLRFKQQS-AAKPQLEDWTQRVTAIELRQESLLSFLEKVVQNQNFVEQLSRKLESMDFSAYNKKRRLSQVDYSQQVPENSFVDNQWSSRPDFGNIFPQDFSNKLRLELSPSVSDINFVSHSTQSSNENGGSPQRRLSEGYPKDA-QRAGGLSFASETLELSDTGTSFTFNMDSALSHKAG--GSENPRLLPLQQNLTSNEEVDGHLSCHLNLTLASSSLQVDKSQYSAKVPQQSHEIGISPELRSN----------ANDKEDDDGTLSSSQEAPVKNQGPATSQIRVNDVFWEQFLTERPGISDAEEASSSFRENTYDDQEDRQSGRAVSRNGKNTEHLTL 468
BLAST of XM_017364639.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5QQ34 ((Heat Stress Transcription Factor family protein {ECO:0000313|EMBL:TKS12948.1}))
HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0
Identity = 302/467 (64.67%), Postives = 366/467 (78.37%), Query Frame = 0
Match: A0A4U5QQ34 ((Heat Stress Transcription Factor family protein {ECO:0000313|EMBL:TKS12948.1}))
HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0
Identity = 302/467 (64.67%), Postives = 366/467 (78.37%), Query Frame = 0
Query: 5 AASGGAGPAPFLLKTYDMVEDRSTDEIVSWSSSRNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVQDQKHLLKNIHRRKPIHSHSNPPSSTVDPERAAFEEEIDKISREKTTLETNLLRIKQQQPTAKLQLEELTQRIGGMEKRQENLLAFLEKVVQNPEFVEHLARKLESIDLSAYNKKRRLPHVEDSQVLREDSFVDNHSFSRPEFGNIFHQDFSNKLTLELSPAVSDINLVSHSTQSSSEGGESPQR-VSEGGIKDALMRSVSTVYAPETLELSDTGTSFTFNMDPSLAQKVGLAGSNSPKLQSLQQCLSSSEEGEGHISCQLNLTLASSSLHANESHYSAK---LAQDSEKSLVSRSIGSGNEVEFRVPQKSKNYSSDGANLSSLHDTATKNQEPETAPPRVNDVFWEQFLTERPGTSETEQASPSARPNLHDEQEGRRQG 467
+A+ G GPAPFL+KTYDMV+D STDEIVSWSS++NSFVVWNPPEFARLLLPT+FKHNNFSSFIRQLNTYGFRKIDPE+WEFANEDF++DQKHLLKNIHRRKPIHSHSNP S VDPERAA+EEEIDK+SR+K LE ++L QQ+ +AKL +E+LTQRI M++RQE LL+FLEK VQNP FVEHLA K+ES+D SAY+KKRRLP V+ S E+SFV+NH SRPE N+ HQDFSNKL LELSPAVSDINL+S STQSS+E G SPQR +SEG KD R+ + APETLELSDTGTS+TF ++P++ + + +GS + SLQ L+S+EE +G ISCQLNLTLASS+L N++ Y A+ L Q+ KS SR S + + RV Q + N ++G LSS +T T NQ P +AP RVND FWEQFLTERPG+SE E+AS + + N +DEQ+ RR G
Sbjct: 8 SAAAGGGPAPFLIKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFARLLLPTFFKHNNFSSFIRQLNTYGFRKIDPEKWEFANEDFLKDQKHLLKNIHRRKPIHSHSNPQGSLVDPERAAYEEEIDKLSRDKAKLEASILGFSQQRSSAKLHVEDLTQRIDTMQQRQEKLLSFLEKAVQNPAFVEHLACKIESMDFSAYSKKRRLPQVDHSMPTAENSFVENHCSSRPE-SNVIHQDFSNKLRLELSPAVSDINLISRSTQSSNEDGGSPQRKISEGNPKDGPTRTSGLLLAPETLELSDTGTSYTFKVNPAVPRDLPASGSQA--QHSLQANLTSNEEVDGLISCQLNLTLASSALQVNQNPYLARMPPLRQEIVKSPESRFNESNKDSDMRVIQ-NMNLGNEGTTLSSSQETPTNNQVPASAPARVNDGFWEQFLTERPGSSENEEASSNYQANSYDEQDERRLG 470
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5ACN4 | E-Value: 0.000e+0, PID: 67.89 | HSF_DOMAIN domain-containing protein {ECO:0000259|... [more] |
| A0A5B7AL01 | E-Value: 0.000e+0, PID: 66.67 | (Putative heat stress transcription factor A-5 {EC... [more] |
| A0A5J5BYU4 | E-Value: 0.000e+0, PID: 66.74 | HSF_DOMAIN domain-containing protein {ECO:0000259|... [more] |
| A0A4S4F280 | E-Value: 0.000e+0, PID: 67.46 | HSF_DOMAIN domain-containing protein {ECO:0000259|... [more] |
| A0A7J7GNA9 | E-Value: 0.000e+0, PID: 67.46 | HSF_DOMAIN domain-containing protein {ECO:0000259|... [more] |
| A0A2R6RS00 | E-Value: 0.000e+0, PID: 67.70 | (Heat stress transcription factor A-5 like {ECO:00... [more] |
| A0A0U3TZ73 | E-Value: 0.000e+0, PID: 63.85 | (Transcription factor HsfA5a {ECO:0000313|EMBL:ALV... [more] |
| A0A5C7ITP0 | E-Value: 0.000e+0, PID: 63.16 | HSF_DOMAIN domain-containing protein {ECO:0000259|... [more] |
| A0A2R6RXQ3 | E-Value: 0.000e+0, PID: 66.52 | (Heat stress transcription factor A-5 like {ECO:00... [more] |
| A0A4U5QQ34 | E-Value: 0.000e+0, PID: 64.67 | (Heat Stress Transcription Factor family protein {... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |