Resource Type:
Polypeptide
Name:
XM_017369271.1
Identifier:
XM_017369271.1-protein
Sequence:
MRIAGDYIEVKRLPRNRTWCNTCLPFGSHYDGFSSFFNGDNILIFDSDAG
ASSRDWLFPSPAGGKQQQRDWIYPSPLLSSSRLSKTPTRRFFSTYPPPPR
APAVPVATVTTPQNRYYPASAGIRRRINFPRRSLKEDVSVEEKKAVPASN
AAKCLKAADAAAFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQV
TDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAV
SLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYP
YAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADS
EGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNH
TLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFD
FRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTV
LSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQ
CARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGV
KAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPK
DFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREK
KLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVE
DSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQ
QASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQIN
DVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRT
ANAERAVINPPNKMEKRRWSVKDVFVVIAEKE
Sequence Length:
932
Sequence Checksum:
4a4605ddf4bbc68e4d745b21f363bea8
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017369271.1, derives from mRNA, XM_017369271.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BM51 ((Putative ion channel CASTOR-like isoform X1 {ECO:0000313|EMBL:MPA69514.1}))
HSP 1 Score: 1339.32 bits (3465), Expect = 0.000e+0
Identity = 692/888 (77.93%), Postives = 747/888 (84.12%), Query Frame = 0
Match: A0A5B7BM51 ((Putative ion channel CASTOR-like isoform X1 {ECO:0000313|EMBL:MPA69514.1}))
HSP 1 Score: 1339.32 bits (3465), Expect = 0.000e+0
Identity = 692/888 (77.93%), Postives = 747/888 (84.12%), Query Frame = 0
Query: 69 RDWIYPSP-LLSSSRLSKTPTRRFFSTYPPPP-------RAPAVPVATVTTPQNRYYPAS---AGIRRRINFPRRS--------LKEDVSVEEKK-----AVPASNAAKCLKAADAAAFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
RDW +PSP + SS LSK PTRR F TYP P R P P +P P AGIRRRI+F RRS K DVS +K V A+ K A R K WQ AF VA+L+ SSL++KNFSLQ+QV DLQ I +LN +LR CS +DS++S +S +ESD +K LKI+AL VSL+LL+ PF F KYVD+VSK +S D+I EEVSLNKQL Y+VD LSV+PYAKP ALLVATLLLI LGGLALFGVTDDSL DCLWLSWT+VA SGNHA+SEG+GPRLVSV+IS GGMLIFAMMLGLVSDSISEK DSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME+DIAKMEF FRGT VICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALR VLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRW QLDGMQFEDVLISFPDAIPCGVKAAS GKIILNP+DSY+LQEGDEVLVIAEDDDTY+P P V RGNLPKDFI +S ERILFCGWRRDMEDMIMVLDA LAP SELWMFNDVPEKEREKKLIDGGLD+ RL NI+LVNREGNAVIRRHLES+PLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE V+HVHR SFSQGSW+GEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEM IR A+LYLHEGEELSF+E+LLRARQRREIVIG+R NAE+AVINPP K E+RRWS+KDVFVVIAEKE
Sbjct: 17 RDWFFPSPSFIHSSHLSKNPTRRLF-TYPRAPKPYVSDSRPPKPPTFQTFSPSGSVLPRDPKYAGIRRRIDFSRRSEKSPGVSGSKSDVSGSSEKRDALDGVSGEKASGGKKFTGLAGGRLKVRWQ----TAFSVAVLITAFSSLLHKNFSLQNQVNDLQDHISKLNVKLRACSLVDSVDSINSIPQESD--HLPNKRLKISALIVSLMLLSTPFLFFKYVDHVSKSRRSLDNITEEVSLNKQLAYRVDAALSVHPYAKPSALLVATLLLICLGGLALFGVTDDSLADCLWLSWTYVADSGNHANSEGIGPRLVSVSISFGGMLIFAMMLGLVSDSISEKFDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAERDKEEMELDIAKMEFHFRGTYVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRIVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWQQLDGMQFEDVLISFPDAIPCGVKAASFGGKIILNPDDSYVLQEGDEVLVIAEDDDTYAPATLPMVWRGNLPKDFIVPKSAERILFCGWRRDMEDMIMVLDASLAPGSELWMFNDVPEKEREKKLIDGGLDITRLGNISLVNREGNAVIRRHLESIPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAMVTHVHRGSFSQGSWIGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMQIRPADLYLHEGEELSFYELLLRARQRREIVIGYRLGNAEKAVINPPAKNERRRWSLKDVFVVIAEKE 897
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AAB6 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1304.27 bits (3374), Expect = 0.000e+0
Identity = 685/894 (76.62%), Postives = 747/894 (83.56%), Query Frame = 0
Match: A0A5J5AAB6 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1304.27 bits (3374), Expect = 0.000e+0
Identity = 685/894 (76.62%), Postives = 747/894 (83.56%), Query Frame = 0
Query: 69 RDWIYPSP-LLSSSRLSKTPTRRFFSTYPP----------PPRAPAVPVATVTTPQNRYYPASAGIRRRINFPRRSLKE--------------DVS-VEEKK----AVPASNAAKCLKAADAAAFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
RDW +PSP + +S LSK PTRRF STYP PP+ + + P P AG+RRRI+F RRS K DVS + EK V A+ K A R K WQ +AF VAIL+ SSL++KNFSL QV DLQ I +L+ +L CS +DS+ D +ES + +K+LK +AL VSL LL++PF F KYVD+VSK + D+I EEVSLNKQL Y+VDV LSV+PYAKPLALLVATLLLI LGGLALFGVTDDS DCLWLSWT++A SGNHA+SEG+GPRLVSV+IS GGMLIFAMMLGLVSD+ISEK DSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME+DIAKMEF FRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRW QLDGMQFEDVLIS+PDAIPCGVKAAS GKIILNP+DSY+LQEGDEVLVIAEDDDTY+P P V RGNLPKDFI +S E+ILFCGWRRDMEDMIMVLDAFLAP SELWMFNDVPEKEREKKL DGGLD++RLVNI+LVNREGNAVIRRHLESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE V+ VHR SFSQGSW+GEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEM IR A+LYLHEGEELSF+EVLLRARQRREIVIG+R NAE+AVINPP K E+RRWS+KDVFVVIAEKE
Sbjct: 17 RDWFFPSPSFIHASHLSKNPTRRF-STYPRVPKPHASDSRPPKQSTFQSFSPSGPVPPRDPKYAGLRRRIDFARRSEKSPRQDESAGVSGRKPDVSGISEKHDVSDGVSVDKASAGKKFTGLAGVRLKVRWQ----MAFSVAILITAFSSLLHKNFSLYKQVNDLQDHISKLDVKLHACSLVDSV---DLIPQES---HFLNKTLKNSALIVSLTLLSIPFIFFKYVDHVSKSRRLSDNITEEVSLNKQLAYRVDVSLSVHPYAKPLALLVATLLLICLGGLALFGVTDDSFADCLWLSWTYIADSGNHANSEGIGPRLVSVSISFGGMLIFAMMLGLVSDAISEKFDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAERDKEEMELDIAKMEFHFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWQQLDGMQFEDVLISYPDAIPCGVKAASCGGKIILNPDDSYVLQEGDEVLVIAEDDDTYAPATLPMVWRGNLPKDFIVPKSTEKILFCGWRRDMEDMIMVLDAFLAPGSELWMFNDVPEKEREKKLTDGGLDIDRLVNISLVNREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAMVTQVHRGSFSQGSWIGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMQIRPADLYLHEGEELSFYEVLLRARQRREIVIGYRQGNAEKAVINPPAKSERRRWSLKDVFVVIAEKE 899
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5XZX5 ((ion channel CASTOR-like isoform X1 {ECO:0000313|RefSeq:XP_022733688.1}))
HSP 1 Score: 1301.19 bits (3366), Expect = 0.000e+0
Identity = 669/894 (74.83%), Postives = 740/894 (82.77%), Query Frame = 0
Match: A0A6P5XZX5 ((ion channel CASTOR-like isoform X1 {ECO:0000313|RefSeq:XP_022733688.1}))
HSP 1 Score: 1301.19 bits (3366), Expect = 0.000e+0
Identity = 669/894 (74.83%), Postives = 740/894 (82.77%), Query Frame = 0
Query: 54 RDWLFPSPA---GGKQQQRDWIYPSPLLSSSRLSKTPTRRFFSTYPPPPRAPAVPVATVTTPQNRYYPASAGIRRRINFPRRSLK-----EDVSV-EEKKAVPASNAAKCLKAADA------AAFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
RDW FPSP+ R YP + + P S + P + P + ++ + P +RRR++F RS + E+V+V E+K+ V SNA K A A RFK WQ +AF +A+L+ SLV+KNFSL +QV DLQ QI LN RL+ C+ LD L D+ + D K LKI AL VS+ LL++P F KY+DY+SK +S D+ +E+V+LN QLEY+VDVFLSV+PYAKPLALLVATL+LI LGGLALFGVTDDSL DCLWLSWTFVA SGNHA SEG+GPRLVSV+IS GGMLIFAMMLGLVSD+ISEK DSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME+DIAKMEFDFRGTSVICRSGSPLI+ADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGG+LVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRWPQLDGMQFEDVLISFPDA+PCGVK AS GKIILNP+DSY LQEGDEVLVIAEDDDTY+P P VRRGNLP DFI +S E+IL CGWRRDMED+IMVLDAFLAP SELWMFNDV E EREKKLIDGGLD+NRL NITLVNREGNAVIRRHLESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE V+ HR SFSQGSW+GEMQQASD+SVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNE+HI+QA+LYLHEGEELSF+E++LRARQRREIVIG+R ANAERAVINPP K E+RRWS KDVFVVI EKE
Sbjct: 13 RDWFFPSPSFIHSTSHHSRSANYP------RKFTTIPRHSPPSDWKKPHKTPTFRSVSSSSSASYGDPNYGRLRRRVDFTLRSQRTSKHEEEVAVLEQKRGV--SNAVSVEKTASGEMGIRIAGQRFKIRWQ----MAFSIAVLITAFGSLVHKNFSLHNQVIDLQDQISALNIRLQACNLLDPL---DTISLLQENDHLSRKGLKILALMVSIALLSMPIFVFKYIDYISKL-RSSDNSSEKVALNTQLEYRVDVFLSVHPYAKPLALLVATLMLICLGGLALFGVTDDSLADCLWLSWTFVADSGNHASSEGMGPRLVSVSISFGGMLIFAMMLGLVSDAISEKFDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAERDKEEMELDIAKMEFDFRGTSVICRSGSPLIVADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGELVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAVPCGVKVASRGGKIILNPDDSYALQEGDEVLVIAEDDDTYAPGALPMVRRGNLPGDFIVPKSTEKILLCGWRRDMEDIIMVLDAFLAPGSELWMFNDVLENEREKKLIDGGLDINRLTNITLVNREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAMVTRGHRGSFSQGSWIGEMQQASDRSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNELHIQQADLYLHEGEELSFYEIILRARQRREIVIGYRLANAERAVINPPAKSERRRWSEKDVFVVITEKE 890
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6X256 ((ion channel CASTOR-like isoform X1 {ECO:0000313|RefSeq:XP_027119917.1}))
HSP 1 Score: 1277.69 bits (3305), Expect = 0.000e+0
Identity = 665/910 (73.08%), Postives = 731/910 (80.33%), Query Frame = 0
Match: A0A6P6X256 ((ion channel CASTOR-like isoform X1 {ECO:0000313|RefSeq:XP_027119917.1}))
HSP 1 Score: 1277.69 bits (3305), Expect = 0.000e+0
Identity = 665/910 (73.08%), Postives = 731/910 (80.33%), Query Frame = 0
Query: 68 QRDWIYPSP--LLSSSRLSKTPTRRFFSTYPPPPRAPAVPVATVTTPQN---------------------RYYPASAGIRRRINFPRRSLKEDVSVEEKKAVPASNAAKCLKAADAAA----------------------FRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
RDW +PS + SS + +T RRF S YP P+ + P YY AG+RR + R L+ S + K+ DA + R WQ AF A+LV SSLV+KNF+L ++V LQ QI++LN RL +CS LDS++ DS+ D + +KSLK A+ SL LL++PF FLKYVDYVS + D + E+VSLNKQL Y+VD FLSV+PYAKPLALLVAT+LLI LGGLALFGVTDDSL D LWLSWT+VA SGNHA+SEG+GPRLVSV+IS GGML+FAMMLGLVSD+ISEK DSLRKG+SEVV QNHTLILGWSDKLGSLLNQLAIANE+LGGG+VVVMAE+DKEEME+DIAKMEFDFRGTSV+CRSGSPLILADLKKVSVSKARAI++LAEDGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRWPQLDGM FE+VLI FPDAIPCGVKAAS+ GKIILNP+DSY+LQEGDEVLVIAEDDDTY+P PTV+RG LPKDFI +S ERILFCGWRRDMEDMIMVLDAFLAP+SELWM N+VPEKEREKKLIDGGLD +RLVNITLVNREGNAV+RRHLESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE VS VHR SFSQGSW+GEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEM IR AELYL EGEELSF+EVLLRARQRREIVIG+R AN ERAVINPP K EKR+WSV DVFVVIAEKE
Sbjct: 19 NRDWFFPSQSFINSSHHIPRTSIRRFSSPYPKRAATPSFQSFPASPPPPPWTPSISNSSPPPPPPPPPPANYYAKYAGVRRGSAYLSRQLRNQKSTSQNDGGGIGGQGIKSKSDDAVSEFREDSKTTTEPAGKRLTGLFGGRLIVRWQ----TAFTAAVLVTAFSSLVHKNFALHNEVIRLQDQIFKLNHRLLVCSLLDSIDDIDSTTH--DINHLSNKSLKNIAVVASLALLSIPFLFLKYVDYVSNSRRLSDILTEKVSLNKQLAYRVDAFLSVHPYAKPLALLVATVLLICLGGLALFGVTDDSLADSLWLSWTYVADSGNHANSEGIGPRLVSVSISFGGMLVFAMMLGLVSDAISEKFDSLRKGRSEVVGQNHTLILGWSDKLGSLLNQLAIANESLGGGMVVVMAERDKEEMELDIAKMEFDFRGTSVLCRSGSPLILADLKKVSVSKARAIVILAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMPFEEVLICFPDAIPCGVKAASYGGKIILNPDDSYVLQEGDEVLVIAEDDDTYAPAALPTVQRGYLPKDFIVPKSAERILFCGWRRDMEDMIMVLDAFLAPDSELWMLNEVPEKEREKKLIDGGLDSSRLVNITLVNREGNAVVRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAMVSQVHRSSFSQGSWIGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMQIRGAELYLREGEELSFYEVLLRARQRREIVIGYRVANTERAVINPPAKNEKRKWSVNDVFVVIAEKE 922
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EJT8 ((Uncharacterized protein isoform 3 {ECO:0000313|EMBL:EOY04642.1}))
HSP 1 Score: 1276.92 bits (3303), Expect = 0.000e+0
Identity = 640/772 (82.90%), Postives = 698/772 (90.41%), Query Frame = 0
Match: A0A061EJT8 ((Uncharacterized protein isoform 3 {ECO:0000313|EMBL:EOY04642.1}))
HSP 1 Score: 1276.92 bits (3303), Expect = 0.000e+0
Identity = 640/772 (82.90%), Postives = 698/772 (90.41%), Query Frame = 0
Query: 161 AAFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
A R K WQ +AF +AIL+ SLV+KNFSL ++V +LQ QI LN RL+ C+ LDS+++N + +ESD S SK LKI AL VSL LL++P F KY+D+VSK S +S +E+VSLNKQLEY+VDVFLSV+PYAKPLALLVATL+LI LGGLALFGVTDDSL DCLWLSWTFVA SGNHA+SEG+GPRL SV+IS GGMLIFAMMLGLVSD+ISEK DSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME+DIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKAR+IIVLAEDGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGG+LVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRWPQLDGMQFEDVLISFPDAIPCGVK ASH GKIILNP+DSY+LQEGDEVLVIAEDDDTY+P P V RGNLP+DFI +S E+IL CGWRRD+EDMIMVLDAFLAP SELWMFN+V E EREKKLIDGGLDL RLVNITLVNREGNAVIRR+LESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLP+RE V+ HR SFSQGSW+GEMQQASD+SVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNE+HIR A+LYLHEGEELSF+E++LRARQRREIVIG+R A AERAVINPP K E+RRWSVKDVFVVI EKE
Sbjct: 6 ACQRIKVRWQ----MAFSIAILITAFGSLVHKNFSLHNRVIELQDQISNLNIRLQACNLLDSVDTN-TMLQESDHLS--SKGLKILALIVSLALLSIPIFIFKYIDHVSKLRSSENS-SEKVSLNKQLEYRVDVFLSVHPYAKPLALLVATLMLICLGGLALFGVTDDSLADCLWLSWTFVADSGNHANSEGIGPRLASVSISFGGMLIFAMMLGLVSDAISEKFDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAERDKEEMELDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARSIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGELVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKVASHGGKIILNPDDSYVLQEGDEVLVIAEDDDTYAPATLPMVWRGNLPRDFIVPKSTEKILLCGWRRDIEDMIMVLDAFLAPGSELWMFNEVLENEREKKLIDGGLDLTRLVNITLVNREGNAVIRRNLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPFREAMVTRSHRGSFSQGSWIGEMQQASDRSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNELHIRYADLYLHEGEELSFYEIILRARQRREIVIGYRLARAERAVINPPAKSERRRWSVKDVFVVITEKE 769
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HGQ6 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1275.77 bits (3300), Expect = 0.000e+0
Identity = 679/914 (74.29%), Postives = 750/914 (82.06%), Query Frame = 0
Match: A0A7J7HGQ6 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1275.77 bits (3300), Expect = 0.000e+0
Identity = 679/914 (74.29%), Postives = 750/914 (82.06%), Query Frame = 0
Query: 69 RDWIYPSPLL---SSSRLSKTPTRRFFSTYPPPPRA-----PAVPVATVTTPQNRYYPASAGIRRRINFPRRSLKEDVSVEEKKAVPASNAAKCL-------KAADAAAFRF-KFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSP-DSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVR---------------------------------RGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
RDW +PSP S L +TPTRRF STYP R T++ P + P AGIRRR++F RR+ + D + AV SN K K++ AF+ K W+ +AF + IL+ SSL++K FS Q+Q+ DLQ I +LN RLR C+ +DS++ +S +ESD +KSLKI+ L L +L++PF F KYV++VSK +S D+IAEEVSLNKQL Y+VDVFLSV+PYAKPLALL+ATLLLI LGGLALFGVTDDSL D LWLSWT+VA SGNHA+SEG+GPRLVSV+IS GGMLIFAMMLGLVSD+ISEKLDSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME DIAKMEFDFRGTSVI RSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRWPQLDGMQFED LISFPDAIPCG+KAAS+ GKIILNP+DSY+LQE DEVLVIAEDDDTY PT PTV RGNLPKDFI +S ERILFCGWRRDMEDMIMVL+AFLAP SELWMFNDVPEKEREKKLIDGGLD+N+LVNI+L+NREGNAVIRRHLESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE K HR S SQGSW+GEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIR+A+LYL +GEELSF+EVLLRARQRREIVIG+R ANAE+AVINPP K EKRRWS++DVFVVIAEKE
Sbjct: 16 RDWFFPSPSFIHSSHHHLPRTPTRRF-STYPRARRPYDSDPKHSSFQTLSPPTD---PKYAGIRRRVDFARRTQRSD----HRHAVSPSNPQKFEVTSSLGNKSSGIGAFQLNKVRWR----MAFLLPILITAFSSLLHKIFSYQNQIIDLQDHISKLNVRLRACTLVDSVDIINSIPQESD--HLPNKSLKISVLIALLTILSIPFLFFKYVEHVSKSRRSSSDNIAEEVSLNKQLAYRVDVFLSVHPYAKPLALLIATLLLICLGGLALFGVTDDSLADSLWLSWTYVADSGNHANSEGVGPRLVSVSISFGGMLIFAMMLGLVSDAISEKLDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAERDKEEMETDIAKMEFDFRGTSVISRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDALISFPDAIPCGIKAASYGGKIILNPDDSYVLQEADEVLVIAEDDDTYCPTTLPTVTEAPFMHIARPARKPQKILLCGWRRDIDDMIVVWRGNLPKDFIVPKSAERILFCGWRRDMEDMIMVLEAFLAPGSELWMFNDVPEKEREKKLIDGGLDINQLVNISLINREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAKTFQGHRASISQGSWIGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRRADLYLQDGEELSFYEVLLRARQRREIVIGYRLANAEKAVINPPGKNEKRRWSLEDVFVVIAEKE 915
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5XZN8 ((ion channel CASTOR-like isoform X2 {ECO:0000313|RefSeq:XP_022733689.1}))
HSP 1 Score: 1274.23 bits (3296), Expect = 0.000e+0
Identity = 657/894 (73.49%), Postives = 732/894 (81.88%), Query Frame = 0
Match: A0A6P5XZN8 ((ion channel CASTOR-like isoform X2 {ECO:0000313|RefSeq:XP_022733689.1}))
HSP 1 Score: 1274.23 bits (3296), Expect = 0.000e+0
Identity = 657/894 (73.49%), Postives = 732/894 (81.88%), Query Frame = 0
Query: 54 RDWLFPSPA---GGKQQQRDWIYPSPLLSSSRLSKTPTRRFFSTYPPPPRAPAVPVATVTTPQNRYYPASAGIRRRINFPRRSLK-----EDVSV-EEKKAVPASNAAKCLKAADA------AAFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
RDW FPSP+ R YP + + P S + P + P + ++ + P +RRR++F RS + E+V+V E+K+ V SNA K A A RFK WQ +AF +A+L+ SLV+KNFSL +QV DLQ QI LN RL+ C+ LD L D+ + D K LKI AL VS+ LL++P F KY+DY+SK +S D+ +E+V+LN QLEY+VDVFLSV+PYAKPLALLVATL+LI LGGLALFGVTDDSL DCLWLSWTFVA SGNHA SEG+GPRLVSV+IS GGMLIFAMMLGLVSD+ISEK DSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME+DIAKMEFDFRGTSVICRSGSPLI+ADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGG+LVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRWPQLDGMQFEDVLISFPDA+PCGVK AS GKIILNP+DSY LQEGDEVLVIAEDDDTY+P P V+ + A ++IL CGWRRD++DMI+VLDAFLAP SELWMFNDV E EREKKLIDGGLD+NRL NITLVNREGNAVIRRHLESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE V+ HR SFSQGSW+GEMQQASD+SVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNE+HI+QA+LYLHEGEELSF+E++LRARQRREIVIG+R ANAERAVINPP K E+RRWS KDVFVVI EKE
Sbjct: 13 RDWFFPSPSFIHSTSHHSRSANYP------RKFTTIPRHSPPSDWKKPHKTPTFRSVSSSSSASYGDPNYGRLRRRVDFTLRSQRTSKHEEEVAVLEQKRGV--SNAVSVEKTASGEMGIRIAGQRFKIRWQ----MAFSIAVLITAFGSLVHKNFSLHNQVIDLQDQISALNIRLQACNLLDPL---DTISLLQENDHLSRKGLKILALMVSIALLSMPIFVFKYIDYISKL-RSSDNSSEKVALNTQLEYRVDVFLSVHPYAKPLALLVATLMLICLGGLALFGVTDDSLADCLWLSWTFVADSGNHASSEGMGPRLVSVSISFGGMLIFAMMLGLVSDAISEKFDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAERDKEEMELDIAKMEFDFRGTSVICRSGSPLIVADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGELVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAVPCGVKVASRGGKIILNPDDSYALQEGDEVLVIAEDDDTYAPGALPMVKEASFMHIARPARKPQKILLCGWRRDVDDMIVVLDAFLAPGSELWMFNDVLENEREKKLIDGGLDINRLTNITLVNREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAMVTRGHRGSFSQGSWIGEMQQASDRSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNELHIQQADLYLHEGEELSFYEIILRARQRREIVIGYRLANAERAVINPPAKSERRRWSEKDVFVVITEKE 890
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834H957 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7149524.1}))
HSP 1 Score: 1271.91 bits (3290), Expect = 0.000e+0
Identity = 667/940 (70.96%), Postives = 744/940 (79.15%), Query Frame = 0
Match: A0A834H957 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7149524.1}))
HSP 1 Score: 1271.91 bits (3290), Expect = 0.000e+0
Identity = 667/940 (70.96%), Postives = 744/940 (79.15%), Query Frame = 0
Query: 46 DSDAGASSRDWLFPSPAGGKQQQRDWIYPSPLLSSSRLSKTPTRRFFSTYPPPPRAPAVPVATVTTPQNRYYPASAGIRRRINFP----------RRSLKEDVSV--------EEKKAVPASNAAKCLKAADAAAFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYY--SKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVR---------------------------------RGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
DS ++SRDWLF SP + + S++ + TRR F + P P P +V+ P R + G+RR I F +R+ + +V V EE V A K R K WQ + +AIL L SSL++KNFSL +QV DLQ I +LN RLR C+ D ++ +S +S Y +KSLKI+AL V L +L+LPF F KY +V K S+ PD+ AEEVSLNKQ+ Y+VDVFLSV+PYAKP++LLVATLLLI LGGLALFGVT+DSLTDCLWLSWT+VA SGNH +SEG+GPRLVSV+IS GGMLIFAMMLGLVSD+ISEKLDSLRKG+SEVV+Q HTLILGWSDKLGSLLNQL+IANENLGGGIVVVMAE+DKEEME+DIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLA+DGNADQSDARALRTVLSLTGVKEGL+GHIVVEL DLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIW DILGFE CEFYIKRWPQLDGMQFEDVLISFPDAIPCGVK AS+ GKIILNP++SY+LQEGDE+LVIAEDDDTYSP+ FPTV+ RG+LPKDFI +S ERILFCGWRRDMEDMIMVLDAFLAP SELWMFN+V E EREKKLIDGGLD+ RL NI++VNREGNAVIRRHLESLPLESF+SILILADESVEDSA++ADSRSLATLLLIRDIQAKRLP+RE VS HR S S GSW+G+MQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQA+LY+ EGEELSF+EVLLRARQRREIVIG+R ANAE+AVINPP K E+RRWSVKDVFVVIAEKE
Sbjct: 6 DSSPPSTSRDWLFQSPPLTQSAHHHRHSSTRTFSTNNPRR--TRRTFVSDPKPSSFQTSPSVSVSAPM-RDSRSFGGLRRHIEFDSGRSSRRYGGKRNSRREVEVSSDSGGNTEEYGGVLGEKVANGKKFDGFGGGRLKVRWQ----LGCLIAILFTLSSSLLHKNFSLHNQVIDLQDHISKLNVRLRACNLSDPVDIINSIPH----NSVYLPNKSLKISALIVLLTILSLPFLFFKYFHHVLKSSRLPDNTAEEVSLNKQIAYRVDVFLSVHPYAKPMSLLVATLLLICLGGLALFGVTEDSLTDCLWLSWTYVADSGNHTNSEGIGPRLVSVSISFGGMLIFAMMLGLVSDAISEKLDSLRKGRSEVVEQYHTLILGWSDKLGSLLNQLSIANENLGGGIVVVMAERDKEEMELDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLADDGNADQSDARALRTVLSLTGVKEGLRGHIVVELGDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWADILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKVASYGGKIILNPDESYVLQEGDEILVIAEDDDTYSPSTFPTVKEAPFIDITRPARKPQKILLCGWRRDIDDMIAVWRGHLPKDFIVPKSSERILFCGWRRDMEDMIMVLDAFLAPGSELWMFNEVLENEREKKLIDGGLDITRLANISIVNREGNAVIRRHLESLPLESFDSILILADESVEDSAMQADSRSLATLLLIRDIQAKRLPFREASVSQGHRGSSSPGSWIGDMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQADLYIQEGEELSFYEVLLRARQRREIVIGYRLANAEKAVINPPAKNEQRRWSVKDVFVVIAEKE 934
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: V4TUI3 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1271.14 bits (3288), Expect = 0.000e+0
Identity = 673/903 (74.53%), Postives = 756/903 (83.72%), Query Frame = 0
Match: V4TUI3 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1271.14 bits (3288), Expect = 0.000e+0
Identity = 673/903 (74.53%), Postives = 756/903 (83.72%), Query Frame = 0
Query: 59 PSPAGGKQQQRDWIYPSPLLSSSR---LSKTPT--RRFFST------YPP---PPRAPAVPVATVTTPQNRYYPASAGIRRRI-------NFPRRSLKEDVSVEEKKAVPAS-----NAAKCLKAADAAAF---RFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
PSP+ RDW++PS + S SKTP RRF S PP P + PA + + + AG+RRR P+R +E+ +V ++ AV ++ + K ++ A F R KF W + + I++ +SLV+KNFSL +QV +LQ+Q+ +LN RLR C+ LDS + S + D++ S+ LK AL VSL LL++P LKY+DYVSK S+SPD+I+EEVSL+KQL Y+VDVF SV+PYAKPLALLVATLLLI LGGLALFGVTDD+L DCLWLSWTFVA SGNHA+SEG+GPRLVSV+IS GGMLIFAMMLGLVSDSISEK DSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME+DI+KMEFDF+GTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGGDLV+TVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRWP LDGM FED LISFPDAIPCGVK AS GKII+NP+DSYILQEGDE+LVIAEDDD+Y+P + P VRRGNLPKDFI +S E+ILFCGWRRDMEDMIMVLDAFLAP SELWMFNDVPE +REKKLIDGGLDL+RL+NI+LVNREGNAVIRRHLESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE +VS VHR SFSQGSW+GEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNE+HIRQA+LYL +GEELSF EV+LRARQRREIVIG+R+ANAERAVINPP K EKRRWS++DVFVVIAEKE
Sbjct: 7 PSPSSS----RDWLFPSHSFAHSYDIYTSKTPKYHRRFSSNPRLSQPLPPDSKPHKTPAFHSVSSSNSCSFSEYKYAGLRRRSYSSRRAGTSPKR--EENGTVLQRNAVVSNRNVGVSEEKTSESKMIAGFYGQRVKFRWH----MVISLVIMITFFTSLVHKNFSLHNQVDELQNQVSKLNSRLRACNLLDSTDVIRSISK--DSEQLSSEGLKNLALIVSLTLLSIPVVILKYIDYVSK-SRSPDNISEEVSLSKQLAYRVDVFFSVHPYAKPLALLVATLLLICLGGLALFGVTDDNLADCLWLSWTFVADSGNHANSEGIGPRLVSVSISFGGMLIFAMMLGLVSDSISEKFDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAEQDKEEMELDISKMEFDFKGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDLVQTVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPTLDGMPFEDALISFPDAIPCGVKVASCGGKIIMNPDDSYILQEGDEILVIAEDDDSYAPAELPMVRRGNLPKDFILPKSAEKILFCGWRRDMEDMIMVLDAFLAPGSELWMFNDVPENDREKKLIDGGLDLSRLMNISLVNREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREARVSQVHRGSFSQGSWIGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNELHIRQADLYLRKGEELSFLEVILRARQRREIVIGYRSANAERAVINPPLKSEKRRWSLQDVFVVIAEKE 896
BLAST of XM_017369271.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5D2DAW8 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1269.6 bits (3284), Expect = 0.000e+0
Identity = 663/889 (74.58%), Postives = 735/889 (82.68%), Query Frame = 0
Match: A0A5D2DAW8 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})
HSP 1 Score: 1269.6 bits (3284), Expect = 0.000e+0
Identity = 663/889 (74.58%), Postives = 735/889 (82.68%), Query Frame = 0
Query: 69 RDWIYPSP--LLSSSRLSKTPTR-RFFSTYPPPPRAPAVPVATVTTPQNRYYPASAGI----------RRRINFPRRSLK------EDVSVEEKKAVPASNAAKCLKAADAA------AFRFKFSWQRFVVIAFPVAILVALISSLVNKNFSLQSQVTDLQHQIYRLNGRLRLCSGLDSLNSNDSSYEESDTDSYYSKSLKITALAVSLILLALPFFFLKYVDYVSKKSKSPDSIAEEVSLNKQLEYKVDVFLSVYPYAKPLALLVATLLLIFLGGLALFGVTDDSLTDCLWLSWTFVAASGNHADSEGLGPRLVSVTISCGGMLIFAMMLGLVSDSISEKLDSLRKGKSEVVKQNHTLILGWSDKLGSLLNQLAIANENLGGGIVVVMAEKDKEEMEVDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLQGHIVVELSDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFEGCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKAASHFGKIILNPEDSYILQEGDEVLVIAEDDDTYSPTKFPTVRRGNLPKDFIEAESEERILFCGWRRDMEDMIMVLDAFLAPNSELWMFNDVPEKEREKKLIDGGLDLNRLVNITLVNREGNAVIRRHLESLPLESFNSILILADESVEDSAIKADSRSLATLLLIRDIQAKRLPYRENKVSHVHRDSFSQGSWMGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQAELYLHEGEELSFFEVLLRARQRREIVIGFRTANAERAVINPPNKMEKRRWSVKDVFVVIAEKE 932
RDW +PSP + S+S ++P R FST P R+ T R +S RRRI RRS K E +E+K+ V S A +K A R K WQ +A +AIL SLV+KNFSL +QV DLQ QI + RL+ C+ D+ ++ S +ESD S SK LKI AL VS+ LL++P F KY+DY+SK +S + +E+VSLNKQLEY+VDV LSV+PYAK LALLVATL+LI LGGLALFGVTDDSL DCLWLSWT+VA SGNHA+SEG+GPRLVSV+IS GGMLIFAMMLGLVSD+ISEKLDSLRKG+SEVV+QNHTLILGWSDKLGSLLNQLAIANE+LGGGIVVVMAE+DKEEME+DIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAI+VLA+DGNADQSDARALRTVLSLTGVKEGL+GHIVVELSDLDNEVLVKLVGG+LVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFE CEFYIKRWPQLDGMQFEDVLISFPDAIPCGVK AS GKIILNPEDSY+LQEGDEVLVIAEDDDTY+P P V RG+LP DFI + E+IL CGWRRDMEDMIMVLDAFLAP SELWMFN+V E ERE+KLIDGGLDL+RLVNITLV+REGNAVIRRHLESLPLESF+SILILADESVEDSAI+ADSRSLATLLLIRDIQAKRLPYRE V+ R SFS+GSW+GEMQQASD+SVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNE+HIR AELYLHEGEELSF+E++LRAR +REI+IG+R ANAERAVINPPNK E+RRWSVKDVFVVI+EKE
Sbjct: 14 RDWFFPSPSFIHSTSNSPQSPNYPRKFSTIPRHSRSSPTDSKPPKTSTFRSVSSSGSAAYGDQKYGRGRRRIELIRRSEKTAKQEKEGPVLEQKRDV--SKAVSGVKTAIGEMGIRVFGQRVKIRWQ----MASYIAILFTAFGSLVHKNFSLHNQVIDLQDQISTMTIRLQACNTSDTFDTI-SILQESDHLS--SKGLKILALTVSIALLSMPLFVFKYIDYISK-FRSSYNCSEKVSLNKQLEYRVDVLLSVHPYAKALALLVATLMLICLGGLALFGVTDDSLADCLWLSWTYVADSGNHANSEGMGPRLVSVSISFGGMLIFAMMLGLVSDAISEKLDSLRKGRSEVVEQNHTLILGWSDKLGSLLNQLAIANESLGGGIVVVMAERDKEEMELDIAKMEFDFRGTSVICRSGSPLILADLKKVSVSKARAIVVLADDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGELVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPQLDGMQFEDVLISFPDAIPCGVKVASRGGKIILNPEDSYVLQEGDEVLVIAEDDDTYAPGALPMVWRGSLPGDFIVPKLMEKILLCGWRRDMEDMIMVLDAFLAPGSELWMFNEVVESERERKLIDGGLDLSRLVNITLVHREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKRLPYREAMVTRGQRGSFSRGSWIGEMQQASDRSVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNELHIRLAELYLHEGEELSFYEIILRARLKREIIIGYRLANAERAVINPPNKNERRRWSVKDVFVVISEKE 892
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BM51 | E-Value: 0.000e+0, PID: 77.93 | (Putative ion channel CASTOR-like isoform X1 {ECO:... [more] |
| A0A5J5AAB6 | E-Value: 0.000e+0, PID: 76.62 | Castor_Poll_mid domain-containing protein {ECO:000... [more] |
| A0A6P5XZX5 | E-Value: 0.000e+0, PID: 74.83 | (ion channel CASTOR-like isoform X1 {ECO:0000313|R... [more] |
| A0A6P6X256 | E-Value: 0.000e+0, PID: 73.08 | (ion channel CASTOR-like isoform X1 {ECO:0000313|R... [more] |
| A0A061EJT8 | E-Value: 0.000e+0, PID: 82.90 | (Uncharacterized protein isoform 3 {ECO:0000313|EM... [more] |
| A0A7J7HGQ6 | E-Value: 0.000e+0, PID: 74.29 | Castor_Poll_mid domain-containing protein {ECO:000... [more] |
| A0A6P5XZN8 | E-Value: 0.000e+0, PID: 73.49 | (ion channel CASTOR-like isoform X2 {ECO:0000313|R... [more] |
| A0A834H957 | E-Value: 0.000e+0, PID: 70.96 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7149... [more] |
| V4TUI3 | E-Value: 0.000e+0, PID: 74.53 | Castor_Poll_mid domain-containing protein {ECO:000... [more] |
| A0A5D2DAW8 | E-Value: 0.000e+0, PID: 74.58 | Castor_Poll_mid domain-containing protein {ECO:000... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |