XM_017371729.1

Resource Type: 
Polypeptide
Name: 
XM_017371729.1
Identifier: 
XM_017371729.1-protein
Sequence: 
MDHKTWLWRKKPSEKTILATDKTDQNEEEKEVHLESLVKNLNETLTSVLR
DSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANET
ITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTE
TTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKM
EKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLE
AECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNNATGLTI
ERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTA
SKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLSSSFDLAYDDELVHSRS
LALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVS
SDVSKTFSNRLMSDSREHDLEISGKELVPVEPLVEISDACWPQDVLKVIL
DQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAALLPVSGYITWKTPT
SSPLKDCLKKMSDIGILVDERESSRNEPKIVKAQDEDLEALLKVANEKND
KLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTV
SKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTK
KDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFE
KVVSTPNTTESKSKLNQRSSLRDMLDEHSGEPTTLESPKTKEIISTSEKK
ISSTIHYKNQDVLISPKVHFLGGKHEALTPVRTMAIIPSKKQEGSSLLKK
LFLRRKRGTKVKRSLSFRT
Sequence Length: 
869
Sequence Checksum: 
928d3ec251ee3849e06732b3fe6a902f
View location in JBrowse: 
DCARv2_Chr9:1461204..1464197-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017371729.1, derives from mRNA, XM_017371729.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DQ24 ((Filament-like protein {ECO:0000313|EMBL:GFS40030.1}))

HSP 1 Score: 731.48 bits (1887), Expect = 0.000e+0
Identity = 436/866 (50.35%), Postives = 588/866 (67.90%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDKTD----QNEEE-----KEVHLESLVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNNATGLTIERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVEPL--------VEISDAC------WPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAALLPVSGYITWKTPTSSPLKDCLKKMSDIGILVDERESSRNEPKIVKAQDEDLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKSKLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKVHFLGGKHEA-LTPVRTMAIIPSKK 841
            MD+KTWLWRK+ SEKT++A  K+D     NEEE     KE+ LE  + N NE L S L +S  KD+++A+H K  ++A+  ++KAE  AV LKQ+LD+AL Q   +NE +T L +ALK+S+Q++   RE+ E+++HDAVM TSREFEK QKKLE++ TE +KRL NL VEN+ LS+ALL+ E++I+ L++  +QTE EF TLMARLD +EKEN FLKYEFR+LEKELEIRNEE+EFNR+SAD SH+QHLES KK++KLEAECQRLR+L+RKR PGPAA A++++EVE+ GR  +ET RR++      T++   +   K  SFLI RL  +EEENK LKE++ KKDDEIHSS+    QTAS LS VEA+L +L +  +    S    S   + S S+  A   EL H RS       +  +TP  K  GV +MSLMDDFVEMEKLAIV V +P GSS  S D +   S   + +S  + L+  GKELV VE          ++  D        W Q VLK+ILDQ RIS ++ D+LLE+I++ L+    + + D   + L+P+SGYITWK+P SSP      + +  G L +E    ++E K  ++  ++LEA L +AN++++ L  QL E+E+ +G L+TEL TLKESK II +Q+E+QKL+NEDL  QLTV+K++L+++  K+S LEVELE++S CCEE EATCLEL LQLESV+ K+  K+  D +++LLQT  EI AASAKLAECQETI +LGKQLK+L+S +++S F KV +T  +    S  +QRSSL D ML E   +    +SPKTKEIIST E K  S +H      L++P   +LG KHE  ++ V   AI+PSKK
Sbjct:    1 MDNKTWLWRKRSSEKTLVANTKSDFSSKGNEEEMLPTEKEISLERSLANFNEKLASALCESAAKDEVLARHAKTVEEALTDREKAEAAAVSLKQDLDKALQQKAESNERLTQLNAALKDSMQQLTLVREEQEQTIHDAVMKTSREFEKSQKKLEEKLTEKSKRLSNLTVENARLSKALLVNESLIEDLSKRTSQTEAEFNTLMARLDLVEKENAFLKYEFRMLEKELEIRNEEIEFNRQSADVSHRQHLESKKKITKLEAECQRLRILVRKRFPGPAALAKIKSEVEVVGRNQSETRRRSL-VVRDTTLQNPPDVPNKKISFLIERLCEMEEENKNLKEIVAKKDDEIHSSQIVCDQTASLLSKVEARLGELSRVQRSKDLSPSSSSGISNHSESWASALISELEHFRS-------QKPTTPHNKF-GVLEMSLMDDFVEMEKLAIVTVGTPLGSSCASLDANNALSIS-VEESGGYQLDSRGKELVAVEQNRSDDIEQEIQTKDVSTQDGYDWLQSVLKLILDQTRISKRNFDDLLEDIRIGLTYMKTSCASDPGASGLVPISGYITWKSPNSSPRVMSETEQAQFG-LREENRGLKDEIKNTESSQKELEAKLSLANDRSEALRNQLRESEQSVGYLETELRTLKESKGIIEDQVENQKLINEDLDTQLTVAKVKLNEVLRKMSSLEVELEDKSHCCEELEATCLELQLQLESVSQKEVPKESADQEERLLQTGWEITAASAKLAECQETILSLGKQLKSLASSRQTSVFNKVSTTAISNRKLS--HQRSSLLDQMLAEDDAQAD--KSPKTKEIISTVEAKKPSFLH------LVAPPEAYLGPKHETHISFVGCRAIVPSKK 845
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q601 ((Filament-like plant protein {ECO:0000313|EMBL:PSS02699.1}))

HSP 1 Score: 720.694 bits (1859), Expect = 0.000e+0
Identity = 432/866 (49.88%), Postives = 588/866 (67.90%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDKTD----QNEEE-----KEVHLESLVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNNATGLTIERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVEPL--------VEISDAC------WPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAALLPVSGYITWKTPTSSPLKDCLKKMSDIGILVDERESSRNEPKIVKAQDEDLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKSKLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKVHFLGGKHEA-LTPVRTMAIIPSKK 841
            MD+KTWLWRK+ SEKT++A  K+D     NEEE     KE+ LE  + N NE L S L +S  KD+++A+H K  ++A+  ++KAE  AV LKQ+L++AL Q   +NE +T L +ALK+S+Q++   RE+ E+++HDAVM TSREFEK QKKLE++ TE +KRL NL VEN+ LS+ALL+ EN+I+ L++  +QTE EF TLM RLD +EKEN FLKYEFR+LEKELEIRNEE+EFNR+SAD SH+QHLES KK++KLEAECQRLR+L+RKRLPGPAA A++++EVE+ GR  +ET RR++      T++   +   K  SFLI RL  +EEENK LKE++ KKDDEIHSS+    QTAS LS VEA+L +L +  +    S    S   + S S+  A   EL H RS       +  +TP  K  GVS+MSLMDDFVEMEKLAIV V +P GSS  S D +   S   + +S  + L+  GKELV VE          ++  D        W Q VLK+ILDQ RIS ++ D+LL++I++ L+    + + D   + L+P+SGYITWK+P SSP      + +  G L +E    ++E K  ++  ++LEA L +AN++++ L  QL E+E+ +G L+TEL TLKESK II +Q+E+QKL+N+DL  QLTV+K++L+++  K+S LEVELE++S CCEE EATCLEL LQLESV+ K+  K+ +D +++LLQT  EI AASAKLAECQETI +LGKQLK+L+S +++S F KV +T  +    S  +QRSSL D ML E   +    +SPK KEIIST E K  S +H      L++P   +LG KH+  ++ V   AI+ SKK
Sbjct:    1 MDNKTWLWRKRSSEKTLVANTKSDFSSKGNEEEMLPTEKEISLELSLANFNEKLASALCESAAKDEVLARHAKIVEEALTDREKAEAAAVSLKQDLEKALQQKAESNERLTQLNAALKDSMQQLTLVREEQEQTIHDAVMKTSREFEKSQKKLEEKLTEKSKRLSNLTVENARLSKALLVNENLIEDLSKRTSQTEAEFNTLMTRLDLVEKENAFLKYEFRMLEKELEIRNEEIEFNRQSADVSHRQHLESKKKITKLEAECQRLRILVRKRLPGPAALAKIKSEVEVVGRNQSETKRRSL-VVRDTTLQNPPDVPNKKISFLIERLCEMEEENKNLKEIVAKKDDEIHSSQIVCDQTASMLSKVEARLGELSRVQRSKDLSPSSSSGISNHSESWASALISELEHFRS-------QKPTTPHNKF-GVSEMSLMDDFVEMEKLAIVTVGTPIGSSCASLDANNALSIS-VEESGGYQLDSRGKELVAVEQNRSDDIEQEIQTKDVSTQDGYDWLQSVLKLILDQTRISKRNFDDLLDDIRIGLTYMKTSCASDPGASGLVPISGYITWKSPNSSPRVMSETEHAQSG-LQEENRGLKDEIKNTESSQKELEAELSLANDRSEALRNQLRESEQSVGYLETELRTLKESKGIIEDQVENQKLINDDLDTQLTVAKVKLNEVLRKMSSLEVELEDKSHCCEELEATCLELQLQLESVSQKEVPKESVDQEERLLQTGWEITAASAKLAECQETILSLGKQLKSLASSRQTSVFNKVSTTAISNRKLS--HQRSSLLDQMLAEDDAQAD--KSPKMKEIISTVEAKKPSFLH------LVAPPEAYLGPKHDTHISFVGCRAIVLSKK 845
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RH13 ((Filament-like plant protein {ECO:0000313|EMBL:PSS29322.1}))

HSP 1 Score: 712.99 bits (1839), Expect = 0.000e+0
Identity = 442/871 (50.75%), Postives = 575/871 (66.02%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDKTD----QNEEE-----KEVHLESLVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIH--GRKHTETTRRNMNNATGLTIERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVEPL--------VEISDAC------WPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAALLPVSGYITWKTPTSSP--LKDCLKKMSDIGILVDERESSRNEPKIVKAQDEDLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKSKLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKVHFLGGKHEA-LTPVRTMAIIPSKKQ 842
            MD+KTWLWRKK SEKT++   K+D    +NEEE     KEV LE  + NLNE L S L +S  KD+L+A+H K  ++A+  + KAE  AV LKQELD+AL Q   +NE +T L +ALKES+Q++ S RE+HE+++HDAVM TSREFEK QKK+E++ TE +KRL NL VEN+ L +ALL+ EN+I+ L++  +Q E EF TLMARLD +EKEN FLKYEFR+LEKELEIRNEE+EFNR+SA+ SH+QHLES KK++KLEAECQRLR+L+RKR PGPAA A++++EVE+   GR  +E  RR++      T +   +   K   FLI RL  ++EENK LKE+L KKDDEIHSS+    QTAS LS VEA+L +L +  +    S    S   + S S+  A   EL H RS       +  +TP  K  GVS+MSLMDDF EMEKLAIV V +P GS   SSD S   +  L  +   + L+  GKELVPVE          ++  D        W Q VLK+ILDQ RIS +S D+LLE+I+VAL+    + + D   +  +P+SG ITWK+P +SP  LKD LK            ESS+ E          LEA L + N++ + L  QL E+E+ +G L+TEL TLKESK II +Q+E+QKL+NEDL  Q TV+KL+L+++ +KLS LEVELE +S CCEE EATCLEL LQLESV+ K+  K+  D +++LLQT  EI AASAKLAECQETI +LGKQLK+L+S   ++ F KV +T       S  +QRSSL D ML E   +    +SPKTKEIIST E K SS +H      L++P   +L   HE+ +T V   AI+PSKK+
Sbjct:    1 MDNKTWLWRKKSSEKTLVENTKSDFSSKRNEEEMLPTEKEVSLERSLANLNEKLASALCESAAKDELMARHAKTVEEALRDRDKAEATAVSLKQELDKALQQKAESNERLTQLNAALKESMQQLTSVREEHEQTIHDAVMKTSREFEKAQKKVEEKLTEKSKRLSNLTVENARLGKALLVNENLIEDLSKRTSQAEAEFNTLMARLDLVEKENVFLKYEFRMLEKELEIRNEEIEFNRQSANVSHRQHLESTKKITKLEAECQRLRILVRKRFPGPAALAKIKSEVEVEIVGRNQSEMRRRSL-VVRDTTPQSPPDMTHKKIRFLIERLCEMDEENKNLKEILTKKDDEIHSSQIVCDQTASMLSKVEARLGELSRVQRSKDLSPTSSSGISNHSESWASALISELEHFRS-------QKPTTPQNKF-GVSEMSLMDDFAEMEKLAIVTVGTPLGSC-ASSDASNALTISL-EEYGGYQLDSRGKELVPVEQGRSDDIELEIQTKDVSTQDGYDWLQSVLKLILDQTRISKRSFDDLLEDIRVALTYMKTSCASDPGASDPVPISGCITWKSPNASPRGLKDELKNT----------ESSQKE----------LEAKLSLENDRTEALRNQLRESEQSVGYLETELRTLKESKGIIEDQIENQKLINEDLDTQHTVAKLKLNEVLQKLSSLEVELEAKSHCCEELEATCLELQLQLESVSQKEVPKETTDQEERLLQTGWEITAASAKLAECQETILSLGKQLKSLASPHHTAVFNKVSTTAINNRKLS--HQRSSLLDQMLAEDDAQAD--KSPKTKEIISTVEAKKSSFLH------LVAPPEAYLDPNHESHVTFVGCRAIVPSKKR 830
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0ET28 ((Filament-like protein {ECO:0000313|EMBL:GFY89583.1}))

HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0
Identity = 429/869 (49.37%), Postives = 565/869 (65.02%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDKTD----QNEEE-----KEVHLESLVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNNATGLTIERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVEPL--------VEISDAC------WPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAALLPVSGYITWKTPTSSP--LKDCLKKMSDIGILVDERESSRNEPKIVKAQDEDLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKSKLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKVHFLGGKHEA-LTPVRTMAIIPSKKQ 842
            MD+KTWLWRKK SEK ++A  K+D    +NEEE     KEV LE  + NLNE L S L +S  KD+L+A+H K  ++A+  + KAE  AV LKQELD+AL Q   +NE +T L +ALKES+Q++ S RE+HE+++HDAVM TSREFEK QKK+E++ TE +KRL NL VEN+ LS+ALL+ EN+I++L++  +Q E EF TLMARLD +EKEN FLKYEFR+LEKELEIRNEE+EFNR+SA+ SH+QHLES KK++KLEAECQRLR+L+RKR PGPAA A++++EVE+ GR  +E  RR++      T++   +   K                       I+K  +IHSS+    QTAS LS VEAQ+ +L +  +    S    S   + S S+  A   EL H RS       +  +TP  K  GVS+MSLMDDFVEMEKLAIV V +P GS   SSD S T +  L  +   + L+  GKELVPVE          ++  D        W Q VLK+ILDQ RIS +S D+LLE+I++AL+    + + D   +  +P+SG ITWK+P +SP  LKD LK          + ESS+ E          LEA L + N++ + L  QL E+E+ +G L+TEL TLKESK II +Q+E+QKL+NEDL  Q TV+KL+L+++ +KLS LEVELE +S CCEE EATCLEL LQLESV+ K+  K+  D +++LLQT  EI AASAKLAECQETI +LGKQLK+L+   ++S F KV +T       S  +QRSSL D ML E   +    +SPKTKEIIST E K SS +H      L++P   +L  KHE+ +T V   AI+PSKK+
Sbjct:    1 MDNKTWLWRKKSSEKILVANTKSDFSSKRNEEEMLPTEKEVSLERSLANLNEKLASALCESAAKDELMARHAKTVEEALTDRDKAEATAVSLKQELDKALQQKAESNERLTQLNAALKESMQQLTSVREEHEQTIHDAVMKTSREFEKAQKKVEEKLTEKSKRLSNLTVENAQLSKALLVNENLIENLSKRTSQAEAEFNTLMARLDLVEKENAFLKYEFRMLEKELEIRNEEIEFNRQSANVSHRQHLESTKKITKLEAECQRLRILVRKRFPGPAALAKIKSEVEVVGRNQSEMRRRSL-VVRDTTLQSPPDMTNKK----------------------IRKMTKIHSSQIVCDQTASMLSKVEAQVGELSRVQRSKDLSPTSSSGISNHSESWASALISELEHFRS-------QKPTTPQNKF-GVSEMSLMDDFVEMEKLAIVTVGTPLGSC-ASSDASNTLTISL-EEYGGYQLDSRGKELVPVEQGRSDDIELEIQTKDVSTQDGYDWLQSVLKLILDQTRISKRSFDDLLEDIRLALTYMKTSCASDPGASDPVPISGCITWKSPNASPWGLKDELK----------DTESSQKE----------LEAKLSLENDRTEALTNQLRESEQSVGYLETELRTLKESKGIIEDQIENQKLINEDLDTQHTVAKLKLNEVLQKLSSLEVELESKSHCCEELEATCLELQLQLESVSQKEVPKETTDQEERLLQTGWEITAASAKLAECQETILSLGKQLKSLAPPHQTSVFNKVSTTAINNRKLS--HQRSSLLDQMLAEDDAQAD--KSPKTKEIISTVEAKKSSFLH------LVAPPEAYLDPKHESHVTFVGCRAIVPSKKR 806
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834GAM4 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7127129.1}))

HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0
Identity = 416/917 (45.37%), Postives = 561/917 (61.18%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDKTDQ----NEEE-----KEVHLESLVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNNATGLTIERSSETYGKNS-------SFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTP-DCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVE--------------PLVEISDACWPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAALLPVSGYITWKTPTSSPL--------------KDCLKKM--------SDIGILVDERESSRNEPKI---------VKAQDE---------DLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKSKLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKVHFLGGKHEALTPVRTMAIIPSKKQEGS 845
            MD++TWLWRK+ SEK I+A   +D     NEEE     KEV+LE  + NLNE L SVL + N KD+L+A+H K A++A   ++KAE EAV LKQELD+AL Q   +NE +T L +ALKES+Q++ S RE+ ++ + DAVM TSRE EK QKKLED+ TE +KRL NL +EN+ +S+ LL+ + +I+ L+  K Q E EF  LMARLD +EKEN FLKYEFR+LEKELE+RNEE  FNR+SAD SHKQ+++S+KK +KLE ECQRLR+L+RKR PGPAA  +M++EVE+  R   +  RRN N A G  + R S +  +N        SFLI  L  +EEENK LKE++ KKDD++H S    +QTASKLS +EAQL  L K  K ++ +          S S+  A   EL + R       + +  TP +CK  GVSDMSLMDDF EMEKLAIV V +P GSS  SSD +   +  L  +S  +D++  GKELVPVE               +       W Q+VL +ILDQ RIS +S D+LLE+IK AL+      S   ++++ +P+SGYITWK+PT  P+              ++ ++++        S++   VD   S  N  K+            +DE         + EA L + NEK++ LM QL E+E  +  L+TEL  LKESK I+ +Q+EHQKL+NE+L  QL V+K +L+++ +K S LEVEL+++S CCEE E TCLEL LQLES  N +  K  +D +++LL T  EI  ASAKLAECQETI +LGKQLKALSS ++S+      +T     +K  L+QR SLRD ML E   +      P+T+EI+S  E K  S +  K  D L                   ++AI+PSKK+ G 
Sbjct:   60 MDNRTWLWRKRSSEKIIIAATASDSSSKGNEEEMLPTEKEVNLERALGNLNENLASVLCELNAKDELLAQHAKMAEEANTDREKAEAEAVALKQELDKALEQKTDSNERLTQLNAALKESMQQLTSVREEQDQRIRDAVMKTSRELEKAQKKLEDKLTEKSKRLSNLTIENTRMSKTLLVNQKLIEDLSEHKYQAEAEFNALMARLDSVEKENAFLKYEFRMLEKELEMRNEESNFNRQSADVSHKQYMDSLKKNAKLETECQRLRILVRKRFPGPAALTKMKSEVEVVRRNQPDMRRRNPNLAMGSLVSRDSSSSLQNPNDIPNKISFLIDHLCDLEEENKTLKEVIAKKDDDLHFSEIVCNQTASKLSKIEAQLEKLSKGQKPMEITN---------SESWATALISELENFR-------DRSPKTPHECKSFGVSDMSLMDDFAEMEKLAIVTVGTPLGSSCASSDANNALALSL-ENSAGYDVDSRGKELVPVEQGQSNYNEREIQTKGVSSPEGYDWLQNVLNLILDQTRISKRSSDDLLEDIKTALT--YMKDSCASEESSKVPISGYITWKSPTVCPIVGLPNGVTQDVSSVREEIRRLGSGKSPSASELEGRVDGPFSESNGEKVRSEINLRKEYGLKDEFKNMESLRKEYEARLSLENEKSEALMNQLQESERNLEDLKTELIFLKESKGIMVDQIEHQKLINEELDTQLNVAKAKLNEVVQKFSSLEVELDDKSHCCEELETTCLELQLQLESANNNEVPKDSVDQEERLLHTGWEITIASAKLAECQETILSLGKQLKALSSPRDSTN-----TTATAAMNKKTLSQRPSLRDQMLAEDGAKAKDPNYPETQEILSPIEAKKPSPLPSK--DAL-------------------SLAIVPSKKKGGG 931
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5Q908 ((Uncharacterized protein {ECO:0000313|EMBL:TKS05227.1}))

HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0
Identity = 423/923 (45.83%), Postives = 566/923 (61.32%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDK-----TDQNEEEKEV----HLESLVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNNATGLTI-----ERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLS-------SSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPS-GSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVE---PLVEISDAC------WPQDVLKVILDQKRISNKSLDELLEEIKVALS--NKIRTSSKDFDQAALLPV----SGYITWKTPTSSPLKDCLKKMSDIGILVDERESSRNEPKIVKAQDE---------DLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKS---KLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKV------HFLGGKHEAL-TPVRTMAIIPSKKQEGSSLLKKLFLRRKRGT-KVKRSL 865
            MD+KTWLWRK+ SEKTI+AT+K        +EE + +     L  + +NLNE L SVL D + KDD V ++EK  Q A AGQ+K E E   LK+ELD A  Q V+ANE +++  +ALK+ +Q++ S RE+HE+ +H AVM T+ EFE+ QK LE +  ET+KRL NL +EN++LS ALLLKE +++ L++  +QT  EF  LMARLD  EKEN FLKYEF +L+KELE+RNEELE+NRRS+DAS +QHLES+ KV+KLEAECQRLR LMRKRLPGPAAF+++++EVE+ G++  E  RR  N    L +     E S E   KN  FLI +L   EEENK+L+E++ +K+ E+ SSR  FS+TAS+LS VEAQ+ +L  D K V  + +  SS   LS        S+  +   EL H R   L      KS    K   V DMSLMDDFVEMEKLA+V+  +PS G ++ SS                     +GKELVPVE     + + D        W Q VL  I  Q+RIS +SL ELLE+I +AL   N       +    + LPV    SGYITWK+P+ S + D L + S     V E      +  +   Q+E         ++EA L  AN K++ LM++L E+E+ +  LQ E+  LKESK +I +Q+E+QK +NEDL  QLTV+K +L++++ K S LEVE E++S CCEE EATCLEL LQLES   K+     ++ + K  Q   EI AAS KLAECQETI NLGKQLKAL+S +E++ F+KV +TP  T + +    +N+R SLRD M+ E   +   L SP       T + + SS  H  N + LISP         + G KH++    V  +AI+PSKKQ G  LL+ L +RRK+GT K  RSL
Sbjct:    1 MDNKTWLWRKRSSEKTIVATNKFGISVKGIDEETQNIPAGNGLGPVRRNLNEKLASVLLDCHAKDDPVTENEKSEQRATAGQEKTEAEVDCLKKELDGAPNQGVAANEELSHSDAALKKCMQQLNSFREEHEQKIHAAVMETTSEFERAQKNLEGKLMETSKRLSNLAIENTNLSNALLLKEKLVEELHKRASQTLAEFNALMARLDSTEKENAFLKYEFHMLQKELEVRNEELEYNRRSSDASRRQHLESVSKVTKLEAECQRLRTLMRKRLPGPAAFSKIKSEVEMLGKEPME-LRRKPNLTRDLVLRDAIMEISPEIPVKNIDFLIEQLRGKEEENKVLREMMTRKNAELQSSRIMFSRTASRLSQVEAQVMELSGDQKSVALTTHSPSSRELLSPIAGSDAGSWANSLISELEHFRDGKL------KSPSGHKAIEVMDMSLMDDFVEMEKLAMVSTQTPSAGGNRPSS---------------------AGKELVPVEQEKQEIHLKDDSTDKSFDWLQVVLNAIFKQQRISKRSLTELLEDINIALGYINHPNVCEPNTSAFSRLPVECDISGYITWKSPSESSIVDSLNETSRADTPVKETSKQHYQSNLTDLQEENDRLKNELNNMEARLHSANNKSEALMMKLRESEQSVERLQAEVEILKESKGMIEDQIENQKSINEDLDTQLTVTKAKLNEVFHKFSSLEVEFEDKSNCCEELEATCLELQLQLESAA-KETLSCGINEEGKQPQDGWEIKAASVKLAECQETILNLGKQLKALASPREAALFDKVFTTPGATAAATNIRNMNRRFSLRDQMIAEDRSKAIILRSP-------TEDAQKSSLNHADNDNELISPNALVCAPEAYFGPKHKSGNAAVGALAIVPSKKQ-GFGLLRSLLMRRKKGTSKKSRSL 886
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B9HS28 ((Uncharacterized protein {ECO:0000313|EMBL:RQO95743.1}))

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 419/923 (45.40%), Postives = 567/923 (61.43%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDK-----TDQNEEEKEV----HLESLVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNNATGLTI-----ERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDPKHVKKSMYGHSSNRSLS-------SSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPS-GSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVE---PLVEISDAC------WPQDVLKVILDQKRISNKSLDELLEEIKVALS--NKIRTSSKDFDQAALLPV----SGYITWKTPTSSPLKDCLKKMSDIGILVDERESSRNEPKIVKAQDE---------DLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKS---KLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKV------HFLGGKHEAL-TPVRTMAIIPSKKQEGSSLLKKLFLRRKRG-TKVKRSL 865
            MD+KTWLWRK+ SEKTI+AT+K        +EE + +     L  + +NLNE L SVL D + KDD V ++EK  Q A AGQ+K E E   LK+ELD A  Q V+ANE +++  + LK+ +Q++ S RE+HE+ +HDAVM  + EFE+ QK LE +  ET+KRL NL +EN++LS ALLLKE +++ L++  +QT  EF  LMARLD  EKEN FLKYEF +L+KE E+RNEELE+NRRS+DAS +QHLES+ KV+KLEAECQRLR LMRKRLPGPAAF+++++EV++ G++  E  RR  N    L +     E S E   KN  FLI +L   EEENK+L+E++ +K+ E+ SSR  FS+TAS+LS VEAQ+ +L  D K V+ +M+  SS   LS        S+  A   EL H R   L      KS    K   V DMSLMDDFVEMEKLA+V+  +PS G ++ SS                     +GKELVPVE     + + D        W Q VL  I  Q+RIS +SL ELLE+I +AL   N       +    + LPV    SGYITWK+P+ S + D L ++S     V E     ++  +   Q+E         ++EA L  A +K++ LM++L E+E+ +  LQ E+  LKESK +I +Q+E+QK +NEDL  QLTV+K +L++++ K S LEVE E++S CCEE EATCLEL LQLES   K+     ++ + K  Q   EI AAS KLAECQETI NLGKQLKAL+S +E++ F+KV +T   T + +    +N+R SLRD M+ E   +   L SP       T + + SS  H  N + LISP         + G KH++    V  +AI+PSKKQ G  LL+ L +RRK+G +K  RSL
Sbjct:    1 MDNKTWLWRKRSSEKTIVATNKFGISVKGIDEETQNIPAGNGLGPVRRNLNEKLASVLLDCHAKDDPVTENEKSEQRATAGQEKTEAEVDCLKKELDGAPSQGVAANEELSHSDATLKKCMQQLNSFREEHEQKIHDAVMEATSEFERAQKTLEGKLMETSKRLTNLAIENTNLSNALLLKEKLVEELHKRASQTLAEFNALMARLDSTEKENAFLKYEFHMLQKEHEVRNEELEYNRRSSDASRRQHLESVSKVTKLEAECQRLRTLMRKRLPGPAAFSKIKSEVQMLGKEPME-LRRKPNLTRDLVLRDPIMEISPEIPVKNIDFLIEQLRGKEEENKVLREMMTRKNAELQSSRIMFSRTASRLSEVEAQVMELSGDQKSVELTMHSPSSRELLSPIAGSDAGSWANALISELEHLRDGKL------KSPSGHKAIEVMDMSLMDDFVEMEKLAMVSTQTPSAGGNRPSS---------------------AGKELVPVEQEKQEIHMKDDSTDKSFDWLQVVLNAIFKQQRISKRSLTELLEDINIALGYINHPNVCEPNTSAFSRLPVECDISGYITWKSPSESSIVDSLNEISRPDTPVKETSKQHDQSNLTDLQEENDRLKNELNNMEARLHSATDKSEALMMKLRESEQSVERLQAEVEILKESKGMIEDQIENQKSINEDLDTQLTVTKAKLNEVFHKFSSLEVEFEDKSNCCEELEATCLELQLQLESAA-KETLSCGINEEGKQPQDGWEIKAASVKLAECQETILNLGKQLKALASPREAALFDKVFTTTGATAAATNIKNMNRRFSLRDQMIAEDRSKAIILRSP-------TEDAQKSSLNHTDNGNELISPNALVCASEAYFGPKHKSGNAAVGALAIVPSKKQ-GFGLLRSLLMRRKKGASKKSRSL 886
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5QCG2 ((Uncharacterized protein {ECO:0000313|EMBL:TKS08104.1}))

HSP 1 Score: 619.772 bits (1597), Expect = 0.000e+0
Identity = 410/928 (44.18%), Postives = 559/928 (60.24%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDK-----TDQNEEEKEVHLES------LVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNN---ATGLTIERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKD------PKHVKKSMYGHS-SNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVEP-----------LVEISDAC-----WPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAAL------LPVSGYITWKTPTSSPLKDCLKKMSDIGILVDERESSRNEPKI---------VKAQDEDLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKS---KLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKV------HFLGGKHEAL-TPVRTMAIIPSKKQEGSSLLKKLFLRRKRGTKVKRSL 865
            MD+KTW WRK+ SEKTI+AT+K        +EE + +   +       V+NLNE L SVL D +    +V ++EK    A AGQ+K + E   LK+ELD    + ++AN+ +++  +ALK+ +Q++ S RE+ E+ +HDAVM  + EFEK QK LE +  ET+KRL NL +EN++LS ALLLKE +++ L++  +QT  EF TLMARLD  EKEN FLKYEF +L+KELE+RNEELE+NRRSADAS +QHLESM+KV+KLEAECQRLR LMRKRLPGPAAF +M++E E+ GR   E  + N+          +    ET  KN  FLI +L   EEENK L+E++ +K+ E+ SSR  FS+TA++LS VEAQL +L  D       KH   S   HS +  S + S   A   EL H R   L      KS  +CK   V DMSLMDDFVEMEKLAIV+  +PS         +++FS              +GKELVP+E            +    D+      W Q VL  I  Q+RIS +SL ELLE+IK+AL      ++ + D AAL        + GYITWK+P  S + + L + S I   V E     ++  +         +K + +++EA L+ A +K + LM++L E+E+ +  LQ E+  LKESK ++ +Q+E+QK +NEDL  QLTV+K +L+++++K S LEVELE+RS CCEE EATCLEL LQLES   K+     ++ + K  Q   EI AAS KLAECQETI NLGKQLKAL+S +E++ F+KV +T   T + +    +N+R SLRD ML E S +   L SP       T + + SS  H  N + LISP         F+G +H+A    V  +AI+PSKKQ    L + L  R+K  +K  RSL
Sbjct:    1 MDNKTWFWRKRSSEKTIVATNKFGISVKGIDEETQNIPTGNGVGPVRAVRNLNEKLASVLLDCH----VVTENEKSVPRATAGQEKEKAEVDCLKKELDGDPKKGLAANQKLSHSDAALKKCMQQLNSFREEQEQKIHDAVMEATSEFEKAQKTLEVKLMETSKRLTNLAIENTNLSNALLLKEKLVEELHKRSSQTVAEFNTLMARLDNTEKENAFLKYEFHMLQKELEVRNEELEYNRRSADASRRQHLESMRKVTKLEAECQRLRTLMRKRLPGPAAFPKMKSEAEMLGRDQMELRKPNLTRDLVVRDPIMGNFPETPVKNVDFLIDQLLGKEEENKALREMMSRKNAELQSSRIMFSRTATRLSQVEAQLVELSGDQRSLELAKHSPSSREIHSPTAGSDTGSLANALIAELEHFRDRKL------KSPSECKDIEVLDMSLMDDFVEMEKLAIVSTQTPSAGG------NRSFS--------------AGKELVPMEQDHSGYRDKKQEIHSKQDSTDKSFDWLQVVLNAIFKQQRISKRSLTELLEDIKIALGYINHPNASEPDAAALSRHPLECDIGGYITWKSPNESSIGNSLNETSSIDTPVKETRKQHDQSNLSNLLEENGRLKNELDNMEARLQSAADKTETLMVKLRESEQSVERLQAEVEILKESKGMVEDQIENQKSINEDLDTQLTVTKAKLNEVFQKFSSLEVELEDRSNCCEELEATCLELQLQLESAA-KETLSCGINKEGKHPQDGWEIKAASVKLAECQETILNLGKQLKALASPREAALFDKVFTTTGATTTATNIRNMNKRFSLRDQMLAEDSSKEIILRSP-------TEDAQKSSLDHSDNGNGLISPNALVCAPEAFIGPEHKACDAAVEALAIVPSKKQGFGLLRRLLMRRKKGASKKSRSL 890
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6M2F7N6 ((Uncharacterized protein {ECO:0000313|EMBL:NUU92961.1}))

HSP 1 Score: 619.772 bits (1597), Expect = 0.000e+0
Identity = 410/928 (44.18%), Postives = 557/928 (60.02%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDK-----TDQNEEEKEVHLES------LVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNN---ATGLTIERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKDP------KHVKKSMYGHS-SNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVEP-----------LVEISDAC-----WPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAAL------LPVSGYITWKTPTSSPLKDCLKKMSDIGILVDERESSRNEPKIVKAQDE---------DLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKS---KLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKV------HFLGGKHEAL-TPVRTMAIIPSKKQEGSSLLKKLFLRRKRGTKVKRSL 865
            MD+KTW WRK+ SEKTI+AT+K        +EE + +   +       V+NLNE L SVL D +    +V ++EK    A AGQ+K E E   LK+ELD    + ++AN+ +++  +ALK+ +Q++ S RE+ E+ +HDAVM  + EFEK QK LE +  ET+KRL NL +EN++LS ALLLKE +++ L++  +QT  EF TLMARLD  EKEN FLKYEF +L+KELE+RNEELE+NRRSADAS +QH+ES +KV+KLEAECQRLR LMRKRLPGPAAF +M++E E+ GR   E  + N+          +    ET  KN  FLI +L   EEENK L+E++ +K+ E+ SSR  FS+TAS+LS VEAQL +L  D       +H   S   HS +  S + S   A   EL H R   L      KS  +CK   V DMSLMDDFVEMEKLAIV+  +PS         +++FS              +GKELVP+E            +    D+      W Q VL  I  Q+RIS +SL ELLE+IK+AL      ++ + D AAL        + GYITWK+P  S + + L + S I   V E     ++  +   Q+E         ++EA L+ A +K + LM++L E+E+ +  LQ E+  LKESK ++ +Q+E+QK +NEDL  QLTV+K +L+++++K S LEVELE+RS CCEE EATCLEL LQLES   K+     ++ + K  Q   EI AAS KLAECQETI NLGKQLKAL+S +E++ F+KV +T   T + +    +N+R SLRD ML E S +   L SP       T + + SS  H  N + LISP         F+G +H+A    V  +AI+PSKKQ    L + L  R+K  +K  RSL
Sbjct:    1 MDNKTWFWRKRSSEKTIVATNKFGISVKGIDEETQNIPTGNGVGPVRAVRNLNEKLASVLLDCH----VVTENEKSVPRATAGQEKEEAEVDCLKKELDGDPKKGLAANQKLSHSDAALKKCMQQLNSFREEQEQRIHDAVMEATSEFEKAQKTLEVKLMETSKRLTNLAIENTNLSNALLLKEKLVEELHKRSSQTVAEFNTLMARLDNTEKENAFLKYEFHMLQKELEVRNEELEYNRRSADASRRQHMESTRKVTKLEAECQRLRTLMRKRLPGPAAFPKMKSEAEMLGRDQMELRKPNLTRDLVVRDPIMGNFPETPVKNVDFLIDQLLGKEEENKALREMMSRKNAELQSSRIMFSRTASRLSQVEAQLVELSGDQRSMELVRHSPSSREIHSPTAGSDTGSLANALIAELEHFRDRKL------KSPSECKDIEVLDMSLMDDFVEMEKLAIVSTQAPSAGG------NRSFS--------------AGKELVPMEQDHSGYRDKKQEIHSKQDSTDKSFDWLQVVLNAIFKQQRISKRSLTELLEDIKIALGYINHPNASEPDAAALSRHPLECDIGGYITWKSPNESSIGNSLNETSSIDTPVKETSKQHDQSNLSNLQEENGRLKNELDNMEARLQSATDKTETLMVKLRESEQSVERLQAEVEILKESKGMVEDQIENQKSINEDLDTQLTVTKAKLNEVFQKFSSLEVELEDRSNCCEELEATCLELQLQLESAA-KETLSCGINKEGKHPQDGWEIKAASVKLAECQETILNLGKQLKALASPREAALFDKVFTTTGATTTATNIRNMNKRFSLRDQMLAEDSSKEIILRSP-------TEDAQKSSLDHSNNGNGLISPNALVCAPEAFIGPEHKAGDAAVEALAIVPSKKQGFGLLRRLLMRRKKGASKKSRSL 890
[Close]
BLAST of XM_017371729.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A385JHR7 ((Uncharacterized protein {ECO:0000313|EMBL:AXY97558.1}))

HSP 1 Score: 617.846 bits (1592), Expect = 0.000e+0
Identity = 416/929 (44.78%), Postives = 561/929 (60.39%), Query Frame = 0
 
Query:    1 MDHKTWLWRKKPSEKTILATDK-----TDQNEEEKEVHLES------LVKNLNETLTSVLRDSNTKDDLVAKHEKRAQDAIAGQKKAEMEAVFLKQELDEALLQNVSANETITYLTSALKESIQKIASAREDHEKSLHDAVMSTSREFEKVQKKLEDRFTETTKRLENLMVENSHLSEALLLKENMIQSLNRLKAQTETEFETLMARLDKMEKENGFLKYEFRILEKELEIRNEELEFNRRSADASHKQHLESMKKVSKLEAECQRLRVLMRKRLPGPAAFAEMRNEVEIHGRKHTETTRRNMNN---ATGLTIERSSETYGKNSSFLIGRLSIVEEENKILKELLIKKDDEIHSSRTSFSQTASKLSHVEAQLRDLLKD------PKHVKKSMYGHS-SNRSLSSSFDLAYDDELVHSRSLALISQEEAKSTPDCKMTGVSDMSLMDDFVEMEKLAIVAVHSPSGSSQVSSDVSKTFSNRLMSDSREHDLEISGKELVPVE-----------PLVEISDAC-----WPQDVLKVILDQKRISNKSLDELLEEIKVALSNKIRTSSKDFDQAAL------LPVSGYITWKTPTSSPLKDCLKKMSDIGILVDERESSRNEPKIVKAQDE---------DLEALLKVANEKNDKLMLQLAETEERIGSLQTELGTLKESKSIIAEQLEHQKLLNEDLHMQLTVSKLELDKLYEKLSYLEVELEERSRCCEEFEATCLELGLQLESVTNKDRTKKDLDPDKKLLQTDSEINAASAKLAECQETIFNLGKQLKALSSRKESSEFEKVVSTPNTTESKS---KLNQRSSLRD-MLDEHSGEPTTLESPKTKEIISTSEKKISSTIHYKNQDVLISPKV------HFLGGKHEAL-TPVRTMAIIPSKKQEGSSLLKKLFLRRKRGT-KVKRSL 865
            MD+KTW WRK+ SEKTI+AT+K        +EE + +   +       V+NLNE L SVL D +    +V ++EK    A AGQ+K E E   LK+ELD    + ++AN+ +++  +ALK+ +Q++ S RE+ E+ +HDAVM  + EFEK QK LE +  ET+KRL NL +EN++LS ALLLK  +++ L++  +QT  EF TLMARLD  EKEN FLKYEF +L+KELE+RNEELE+N RSADAS +QHLESM+KV+KLEAECQRLR LMRKRLPGPAAF++M++E E+ GR   E  + N+          +    ET  KN  FLI +L   EEENK L+E++ +K+ E+ SSR  FS+TAS+LS VEAQL +L  D       KH   S   HS +  S + S   A   EL H R   L      KS  +CK   V DMSLMDDFVEMEKLAIV+  +PS     S      FS              +GKELVP+E            +    D+      W Q VL  I  Q+RIS +SL ELLE+IK+AL      ++ + D AAL        + GYITWK+P  S + + L + S I   + E     ++  +   Q+E         ++EA L+ A +K + LM++L E+E+R+  LQ E+  LKESK ++ +Q+E+QK +NEDL  QLTV+K +L+++++K S LEVELE+RS CCEE EATCLEL LQLES   K+     ++ + K  Q   EI AAS KLAECQETI NLGKQLKAL+S +E++ F+KV +T   T + +    LN+R SLRD ML E   +   L SP       T + + SS  H  N + LISP         ++G +H+A    V  +AI+PSKKQ G  LL++L +RRK+GT K  RSL
Sbjct:    1 MDNKTWFWRKRSSEKTIVATNKFGISVKGIDEETQNIPTGNGVGPVRAVRNLNEKLASVLLDCH----VVTENEKSVPRATAGQEKEEAEVDCLKKELDGDPKKGLAANQKLSHPDAALKKCMQQLNSFREEQEQKIHDAVMEATSEFEKAQKTLEVKLMETSKRLTNLAIENTNLSNALLLKVKLVEELHKRASQTVAEFNTLMARLDNTEKENAFLKYEFHMLQKELEVRNEELEYNHRSADASRRQHLESMRKVTKLEAECQRLRTLMRKRLPGPAAFSKMKSEAEMLGRDQMELRKPNLTRDLVVRDPIMGNFPETPVKNVDFLIDQLLGKEEENKALREMMSRKNAELQSSRIMFSRTASRLSQVEAQLVELSGDQRSLELAKHSPSSREIHSPTAGSDTGSLANALIAELEHFRDRKL------KSPSECKDIEVLDMSLMDDFVEMEKLAIVSTQTPSAGGNSS------FS--------------AGKELVPIELDHSGYRDKKQEIHSKQDSTDKSFDWLQVVLNAIFKQQRISKRSLTELLEDIKIALGYINHPNASEPDAAALSRHPLECDIGGYITWKSPNESSIANSLNETSSIDTPMKETSKQHDQSNLSNLQEENGRLENELDNMEARLQSATDKTETLMVKLRESEQRVERLQAEVEILKESKGMVEDQIENQKSINEDLDTQLTVTKAKLNEVFQKFSSLEVELEDRSNCCEELEATCLELQLQLESAA-KETLSCGINKEGKHPQDGWEIKAASVKLAECQETILNLGKQLKALASPREAALFDKVFTTTGATTTATNIRNLNKRFSLRDQMLAEDRSKEIILRSP-------TEDAQKSSLDHSDNGNGLISPNALVCAPEAYIGPEHKAGDAAVEALAIVPSKKQ-GFGLLRRLLMRRKKGTSKKSRSL 890
Match NameStatsDescription
A0A7J0DQ24E-Value: 0.000e+0, PID: 50.35(Filament-like protein {ECO:0000313|EMBL:GFS40030.... [more]
A0A2R6Q601E-Value: 0.000e+0, PID: 49.88(Filament-like plant protein {ECO:0000313|EMBL:PSS... [more]
A0A2R6RH13E-Value: 0.000e+0, PID: 50.75(Filament-like plant protein {ECO:0000313|EMBL:PSS... [more]
A0A7J0ET28E-Value: 0.000e+0, PID: 49.37(Filament-like protein {ECO:0000313|EMBL:GFY89583.... [more]
A0A834GAM4E-Value: 0.000e+0, PID: 45.37(Uncharacterized protein {ECO:0000313|EMBL:KAF7127... [more]
A0A4U5Q908E-Value: 0.000e+0, PID: 45.83(Uncharacterized protein {ECO:0000313|EMBL:TKS0522... [more]
B9HS28E-Value: 0.000e+0, PID: 45.40(Uncharacterized protein {ECO:0000313|EMBL:RQO9574... [more]
A0A4U5QCG2E-Value: 0.000e+0, PID: 44.18(Uncharacterized protein {ECO:0000313|EMBL:TKS0810... [more]
A0A6M2F7N6E-Value: 0.000e+0, PID: 44.18(Uncharacterized protein {ECO:0000313|EMBL:NUU9296... [more]
A0A385JHR7E-Value: 0.000e+0, PID: 44.78(Uncharacterized protein {ECO:0000313|EMBL:AXY9755... [more]
back to top
Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.