XM_017368666.1

Resource Type: 
Polypeptide
Name: 
XM_017368666.1
Identifier: 
XM_017368666.1-protein
Sequence: 
MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVV
APEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENS
FAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYC
VESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLH
NLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGT
KGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETL
VDWAKPLLADKRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPS
MLEVVAKLEQIPLAKNVSRTLQVKQEHSGRTRTTRTR
Sequence Length: 
387
Sequence Checksum: 
641f164e5f3d53e1c96b4a03086210e2
View location in JBrowse: 
DCARv2_Chr9:5263592..5266634+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017368666.1, derives from mRNA, XM_017368666.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7G8E7 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0
Identity = 272/389 (69.92%), Postives = 324/389 (83.29%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPL-AKNVSRTLQVKQEHSGRTRTTRTR 387
            MG C+G+ AKCAHASSN F+ETT+  S  +   + + ++S+    NK ++A +G+  +SN+L++F++ DLKNATKNFRSDSLLGEGGFG V+K W+DEN+FA SK G+GI VAIKKLK  S QGH+EWLTEVNYLGQLHHENLVKLIGYC E +++LLVYEFM KGSLENHLFR+GVQPIPW+TR+ IA DVARG+SFLHNLD+NVIYRDLKASNILLDSDFNAKLSDFG ARAGPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELLSGRRA+GDERA  VD ETLVDWAKP L D +R+LRIMDTR+GGQY +K AQA A+L L+CL  DPK RP M++V+A LEQ+   +K+V +T + K EH G  +++  R
Sbjct:    1 MGNCLGRPAKCAHASSNLFVETTTPPSTTKDHPYLSTQQSL----NKALIASKGDTPISNNLKSFTFIDLKNATKNFRSDSLLGEGGFGCVFKGWIDENTFAPSKPGTGIVVAIKKLKAESFQGHKEWLTEVNYLGQLHHENLVKLIGYCSEFEHKLLVYEFMPKGSLENHLFRKGVQPIPWATRMSIAVDVARGLSFLHNLDANVIYRDLKASNILLDSDFNAKLSDFGLARAGPTGDNTHVSTRVVGTQGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAMGDERAASVD-ETLVDWAKPFLGDNRRILRIMDTRLGGQYSRKGAQAAAALVLRCLHIDPKNRPPMMDVLATLEQLHTSSKDVPQTPEAKLEHRGVEQSSYHR 384
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PFM2 ((Protein kinase {ECO:0000313|EMBL:PSR90099.1}))

HSP 1 Score: 555.058 bits (1429), Expect = 0.000e+0
Identity = 270/368 (73.37%), Postives = 324/368 (88.04%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNV 367
            MGIC+G+ AKC+HASSNQF E T+  S  Q++S  ++ K+ S +++K  ++ + + S+SN+L+AFS++DLKNATKNFRSDSLLGEGGFG V+K W+DEN+FA SK G+GI VAIKKLKT S QGHREWLTEVNYLGQLHHENLVKLIGYC+ES+NRLLVYEFM KGSLENHLFR+GVQPIPW+TR+ IA DVARG+SFLHNLD+N+IYRDLKASNILLDSDF+AKLSDFG ARAGPTGD THVSTRVVGT+GYAAPEYVATG L+ KSD+YSFGVVLLELLSG+RA+GDE +GG  EETLVDWAKP L D +RVLRIMDTR+GGQYPKK+AQA A+LA+QCL  DPK RP+M++V++ +EQ+  +K+V
Sbjct:    1 MGICLGRPAKCSHASSNQFFERTTPPSKAQKDSTLSSWKTHSENWSKAYLSSKVDTSISNNLKAFSFNDLKNATKNFRSDSLLGEGGFGCVFKGWIDENTFAPSKPGTGIVVAIKKLKTESSQGHREWLTEVNYLGQLHHENLVKLIGYCLESENRLLVYEFMPKGSLENHLFRKGVQPIPWTTRMRIAVDVARGLSFLHNLDANIIYRDLKASNILLDSDFSAKLSDFGLARAGPTGDNTHVSTRVVGTRGYAAPEYVATGHLSPKSDIYSFGVVLLELLSGKRAMGDEASGGA-EETLVDWAKPFLGDCRRVLRIMDTRLGGQYPKKQAQAAAALAVQCLHIDPKNRPAMIDVLSAMEQLHTSKDV 367
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5E4FZT9 ((Full=PREDICTED: kinase {ECO:0000313|EMBL:VVA33081.1}))

HSP 1 Score: 553.903 bits (1426), Expect = 0.000e+0
Identity = 270/380 (71.05%), Postives = 313/380 (82.37%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNVSRTLQVKQEHSG 379
            MG C  KSAKCAHASS  F  +T S++  Q E+ S+ +++ S   NK ++ P+ + SV +SL++FS+ DLKNATKNFRS+SLLGEGGFGWV+K W+D N+FA +K G+G+ VAIK+LK  S QGH+EWL EVNYLGQLHHENLVKLIGYC ESDNRLLVYEFM KGSLENHLFR+GVQPI W+ R++IA DVARG+SFLH+LD+NVIYRDLKASNILLDSDFNA+LSDFG AR GPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELL+GRRA+ DERAG V EETLVDWAKP L+D KRVLRIMDTR+GGQYPKK AQ  A L LQCL  DPK RP M++V+A LE++   KN  RT   K EH G
Sbjct:    2 MGNCCRKSAKCAHASSINFSGSTKSNAKGQLETTSSIQETPSGGLNKALIVPKADTSVPSSLKSFSFSDLKNATKNFRSESLLGEGGFGWVFKGWIDANTFAPTKPGTGLVVAIKRLKRESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWAVRMNIAIDVARGLSFLHSLDANVIYRDLKASNILLDSDFNARLSDFGLARDGPTGDNTHVSTRVVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLTGRRAMDDERAGSV-EETLVDWAKPFLSDTKRVLRIMDTRLGGQYPKKAAQTAAELTLQCLHTDPKYRPLMIDVLATLERLH-TKNTLRTQPHKPEHHG 379
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251NR11 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0
Identity = 269/380 (70.79%), Postives = 313/380 (82.37%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNVSRTLQVKQEHSG 379
            MG C  KSAKCAHASS  F  +T S++  Q ++ S+ +++ S   NK ++ P+ + SV +SL++FS+ DLKNATKNFRS+SLLGEGGFGWV+K W+D N+FA +K G+G+ VAIK+LK  S QGH+EWL EVNYLGQLHHENLVKLIGYC ESDNRLLVYEFM KGSLENHLFR+GVQPI W+ R++IA DVARG+SFLH+LD+NVIYRDLKASNILLDSDFNA+LSDFG AR GPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELL+GRRA+ DERAG V EETLVDWAKP L+D KRVLRIMDTR+GGQYPKK AQ  A L LQCL  DPK RP M++V+A LE++   KN  RT   K EH G
Sbjct:    2 MGNCCRKSAKCAHASSINFSGSTKSNAKGQLDTASSIQETPSGGLNKALIVPKADTSVPSSLKSFSFSDLKNATKNFRSESLLGEGGFGWVFKGWIDANTFAPTKPGTGLVVAIKRLKRESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWAVRMNIAIDVARGLSFLHSLDANVIYRDLKASNILLDSDFNARLSDFGLARDGPTGDNTHVSTRVVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLTGRRAMDDERAGSV-EETLVDWAKPFLSDTKRVLRIMDTRLGGQYPKKAAQTAAELTLQCLHTDPKYRPLMIDVLATLERLH-TKNTLRTQPHKPEHHG 379
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5SGG0 ((probable serine/threonine-protein kinase PBL2 {ECO:0000313|RefSeq:XP_021812893.1}))

HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0
Identity = 269/380 (70.79%), Postives = 312/380 (82.11%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNVSRTLQVKQEHSG 379
            MG C  KSAKCAHASS  F  +T S+   Q ++ S+ +++ S   NK ++A + + SV +SL++FS+ DLKNATKNFRS+SLLGEGGFGWV+K W+D N+FA +K G+G+ VAIK+LK  S QGH+EWL EVNYLGQLHHENLVKLIGYC ESD+RLLVYEFM KGSLENHLFR+GVQPI W+ R++IA DVARG+SFLH+LD+NVIYRDLKASNILLDSDFNA+LSDFG AR GPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELL+GRRA+ DERAG V EETLVDWAKP L D KRVLRIMDTR+GGQYPKK AQ  A LALQCL  DPK RP M++V+A LE++   KN  RT   K EH G
Sbjct:    2 MGNCCRKSAKCAHASSINFSGSTKSNGKGQLDTTSSIQETPSGGLNKALIAAKADSSVPSSLKSFSFSDLKNATKNFRSESLLGEGGFGWVFKGWIDANTFAPTKPGTGLVVAIKRLKRESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSESDSRLLVYEFMPKGSLENHLFRKGVQPISWAVRMNIAIDVARGLSFLHSLDANVIYRDLKASNILLDSDFNARLSDFGLARDGPTGDNTHVSTRVVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLTGRRAMDDERAGSV-EETLVDWAKPFLIDTKRVLRIMDTRLGGQYPKKAAQTAAELALQCLHTDPKYRPLMIDVLATLERLH-TKNTLRTQPHKPEHHG 379
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314XYD1 ((Putative serine/threonine-protein kinase PBL3 {ECO:0000313|EMBL:PQP97939.1}))

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 267/380 (70.26%), Postives = 311/380 (81.84%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNVSRTLQVKQEHSG 379
            MG C  KSAKCAHASS  F  +T S+   Q ++ S+ +++ S   NK ++  + + SV +SL++FS+ DLKNATKNFRS+SLLGEGGFGWV+K W+D N+FA +K G+G+ VAIK+LK  S QGH+EWL EVNYLGQLHHENLVKLIGYC ESD+RLLVYEFM KGSLENHLFR+GVQPI W+ R++IA DVARG+SFLH+LD+NVIYRDLKASN+LLDSDFNA+LSDFG AR GPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELL+GRRA+ DERAG V EETLVDWAKP L D KRVLRIMDTR+GGQYPKK AQ  A LALQCL  DPK RP M++V+A LE++   KN  RT   K EH G
Sbjct:    2 MGNCCRKSAKCAHASSINFSGSTKSNGKGQLDTTSSIQETPSGGLNKALIVAKADTSVPSSLKSFSFSDLKNATKNFRSESLLGEGGFGWVFKGWIDANTFAPTKPGTGLVVAIKRLKRESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSESDSRLLVYEFMPKGSLENHLFRKGVQPISWAVRMNIAIDVARGLSFLHSLDANVIYRDLKASNVLLDSDFNARLSDFGLARDGPTGDNTHVSTRVVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLTGRRAMDDERAGSV-EETLVDWAKPFLIDTKRVLRIMDTRLGGQYPKKAAQTAAELALQCLHTDPKYRPLMIDVLATLERLH-TKNTLRTQPHKPEHHG 379
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7C7Q7 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 278/399 (69.67%), Postives = 326/399 (81.70%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNVS-----------RTLQVKQEHSGRTRTTRTR 387
            MG C GK AKCAHASS+QF ETT+  S  +Q+S  ++++  S + NK ++A +G+ S+SN+L++FS++DLK ATKNFRS+SLLGEGGFG V+K W+DEN+F  SK G+GI VAIKKLKT S QGHREW+TEVNYLGQL HENLVKLIGYC ES++RLLVYEF++KGSLENHLFR+GV+PI W+TR+ IA DVARG+SFLHNLD+NVIYRDLKASNILLDSDFNAKLSDFG AR GPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELLSGRRA GDER+GG  EE LVDWAKP L D +RVLRIMDTR+GGQY KK AQA ASLA+QCL  DPK RPSM +++A LEQ+  +K+V            RT QV   H+  T TT +R
Sbjct:    1 MGNCWGKPAKCAHASSSQFFETTTPPSQAKQDSTPSDQQIPSGNLNKALIASKGDASISNNLKSFSFNDLKTATKNFRSESLLGEGGFGCVFKGWIDENTFTPSKPGTGIVVAIKKLKTESFQGHREWITEVNYLGQLRHENLVKLIGYCSESEHRLLVYEFITKGSLENHLFRKGVEPISWATRLRIAIDVARGLSFLHNLDANVIYRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVVGTQGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRATGDERSGGA-EEFLVDWAKPFLGDNRRVLRIMDTRLGGQYSKKAAQAAASLAVQCLHTDPKNRPSMTDILAALEQLHTSKDVPRASSQAKLDHRRTKQVSYPHNTTTATTNSR 398
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P7W6 ((Protein kinase {ECO:0000313|EMBL:PSR86737.1}))

HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0
Identity = 264/362 (72.93%), Postives = 315/362 (87.02%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQI 361
            MGIC+G+ AKCAHASSNQF E T   S  Q++S  +++++ S +++K  ++ + + S SN+L+AFS++DLK ATKNFRSDSLLGEGGFG V+K W+DEN+FA SK G+G+ VAIKKLKT S QGHREWLTEVNYLG+L HENLVKLIGYC ES+NRLLVYEFM KGSLENHLFR+GVQPIPW+TR+ IA DVARG+SFLHNLD+N+IYRD+KASNILLDSDFNAKLSDFG ARAGPTGD THVSTRVVGT+GYAAPEYVATG L+ KSD+YSFGVVLLELLSG+RA+GDE  GG  EETLVDWAKP L D +RVLRIMDTR+GGQYPKK+AQA A+LA+QCL  DPK RP+M++V++ +EQ+
Sbjct:    1 MGICLGRPAKCAHASSNQFFERTMPPSKAQKDSTFSSRQTQSENWSKAYLSSKVDTSSSNNLKAFSFNDLKTATKNFRSDSLLGEGGFGCVFKGWIDENTFAPSKPGTGVVVAIKKLKTESSQGHREWLTEVNYLGELRHENLVKLIGYCSESENRLLVYEFMPKGSLENHLFRKGVQPIPWTTRMRIAVDVARGLSFLHNLDANIIYRDMKASNILLDSDFNAKLSDFGLARAGPTGDNTHVSTRVVGTRGYAAPEYVATGHLSPKSDIYSFGVVLLELLSGKRAMGDEAPGG-SEETLVDWAKPFLGDSRRVLRIMDTRLGGQYPKKQAQAAAALAVQCLHIDPKNRPAMIDVLSAMEQL 361
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5XNA8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0
Identity = 265/380 (69.74%), Postives = 311/380 (81.84%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNVSRTLQVKQEHSG 379
            MG C  KSAKCAHASS  F  +T S+   Q ++ S+ +++ S   NK+++  + + SV +SL++FS+ DLKNATKNFRS+SLLGEGGFGWV+K W+D N+FA +K G+G+ VAIK+LK  S QGH+EWL EVNYLGQLHH NLVKLIGYC ESDNRLLVYEFM KGSLENHLFR+GVQPI W+ R++IA DVARG+SFLH+L++NVIYRDLKASN+LLDSDFNA+LSDFG AR GPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELL+GRRA+ DERAG V EETLVDWAKP L+D KRVLRIMDTR+GGQYPKK AQ  A L LQCL  DPK RP M++V+A LE++   KN  RT   K EH G
Sbjct:    1 MGNCCRKSAKCAHASSINFSGSTKSNGKGQLDTTSSIQETPSGGLNKSLIVAKADTSVPSSLKSFSFSDLKNATKNFRSESLLGEGGFGWVFKGWIDANTFAPTKPGTGLVVAIKRLKRESFQGHKEWLAEVNYLGQLHHGNLVKLIGYCSESDNRLLVYEFMPKGSLENHLFRKGVQPISWAVRMNIAIDVARGLSFLHSLNANVIYRDLKASNVLLDSDFNARLSDFGLARDGPTGDNTHVSTRVVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLTGRRAMDDERAGSV-EETLVDWAKPFLSDTKRVLRIMDTRLGGQYPKKAAQTAAELTLQCLHTDPKYRPLMIDVLATLERLH-PKNTLRTQPHKTEHHG 378
[Close]
BLAST of XM_017368666.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BMY4 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 266/371 (71.70%), Postives = 315/371 (84.91%), Query Frame = 0
 
Query:    1 MGICMGKSAKCAHASSNQFMETTSSSSDKQQESFSTNKKSVSLSFNKTVVAPEGEISVSNSLRAFSYHDLKNATKNFRSDSLLGEGGFGWVYKAWLDENSFAASKSGSGISVAIKKLKTGSCQGHREWLTEVNYLGQLHHENLVKLIGYCVESDNRLLVYEFMSKGSLENHLFRRGVQPIPWSTRIHIATDVARGISFLHNLDSNVIYRDLKASNILLDSDFNAKLSDFGYARAGPTGDRTHVSTRVVGTKGYAAPEYVATGRLTIKSDVYSFGVVLLELLSGRRALGDERAGGVDEETLVDWAKPLLAD-KRVLRIMDTRMGGQYPKKEAQAVASLALQCLDFDPKLRPSMLEVVAKLEQIPLAKNVSRT 370
            MG C G+ AKCAHASS+QF E+T+ S   +Q+S  +N+++   S NK ++A +G+ S+SN+L++FS++DLK ATKNFRS+SLLGEGGFG V+K W+D N+FA SK G+GI VAIKKLK  S QGHREW+TE+NYLGQLHHENLVKLIGYC ES+ RLLVYEFM KGSLENHLFR+GV+PIPW TR+ IA DVARG+SFLHNLD+N+IYRDLKASNILLDSDF+AKLSDFG AR GPTGD THVSTRVVGT+GYAAPEYVATG LT KSDVYSFGVVLLELLSG+RA+GD+R G   EETLVDWAKP L D +RVLRIMD R+GGQY KK AQA A+LA+QCL  DPK RPSM +V+A LEQ+  +K+V+RT
Sbjct:   41 MGNCWGRPAKCAHASSSQFFESTTRSIKAKQDSSPSNQQTPLSSMNKVLIASKGDTSISNNLKSFSFNDLKTATKNFRSESLLGEGGFGRVFKGWIDVNTFAPSKPGTGIVVAIKKLKPESFQGHREWITELNYLGQLHHENLVKLIGYCSESEQRLLVYEFMPKGSLENHLFRKGVEPIPWVTRMRIAVDVARGLSFLHNLDANIIYRDLKASNILLDSDFSAKLSDFGLARDGPTGDNTHVSTRVVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGKRAMGDDRPGA-SEETLVDWAKPFLGDSRRVLRIMDIRLGGQYSKKGAQAAAALAVQCLHTDPKNRPSMTDVLALLEQLHTSKDVTRT 410
Match NameStatsDescription
A0A7J7G8E7E-Value: 0.000e+0, PID: 69.92Protein kinase domain-containing protein {ECO:0000... [more]
A0A2R6PFM2E-Value: 0.000e+0, PID: 73.37(Protein kinase {ECO:0000313|EMBL:PSR90099.1})[more]
A0A5E4FZT9E-Value: 0.000e+0, PID: 71.05(Full=PREDICTED: kinase {ECO:0000313|EMBL:VVA33081... [more]
A0A251NR11E-Value: 0.000e+0, PID: 70.79Protein kinase domain-containing protein {ECO:0000... [more]
A0A6P5SGG0E-Value: 0.000e+0, PID: 70.79(probable serine/threonine-protein kinase PBL2 {EC... [more]
A0A314XYD1E-Value: 0.000e+0, PID: 70.26(Putative serine/threonine-protein kinase PBL3 {EC... [more]
A0A5B7C7Q7E-Value: 0.000e+0, PID: 69.67Protein kinase domain-containing protein {ECO:0000... [more]
A0A2R6P7W6E-Value: 0.000e+0, PID: 72.93(Protein kinase {ECO:0000313|EMBL:PSR86737.1})[more]
A0A6J5XNA8E-Value: 0.000e+0, PID: 69.74Protein kinase domain-containing protein {ECO:0000... [more]
A0A5J5BMY4E-Value: 0.000e+0, PID: 71.70Protein kinase domain-containing protein {ECO:0000... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.