Resource Type:
Polypeptide
Name:
XM_017371068.1
Identifier:
XM_017371068.1-protein
Sequence:
MADRNGNAKPPVKKESGGGAYAINIDNFSKRLKMLYSHWTESRHEIWGAC
EVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQK
KVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEG
HDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSN
EITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDP
AKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICA
IGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSA
AYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAG
MVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAV
KDVAYSFNEEEEEEKQPKVKPEANGTDASSSKATLRSVNHETSKEELRRQ
HQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPR
DLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNV
PGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTS
RESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLE
AHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMV
GNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMD
FQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSC
LVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDS
IPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWE
FLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDG
EEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGK
SRVPDRRHPSGSLPKRPRMR
Sequence Length:
1070
Sequence Checksum:
ff008b51c383b81172f8049c59934bbb
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017371068.1, derives from mRNA, XM_017371068.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6I4V8 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1856.26 bits (4807), Expect = 0.000e+0
Identity = 890/1070 (83.18%), Postives = 979/1070 (91.50%), Query Frame = 0
Match: F6I4V8 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1856.26 bits (4807), Expect = 0.000e+0
Identity = 890/1070 (83.18%), Postives = 979/1070 (91.50%), Query Frame = 0
Query: 4 RNGNAKPPVKKESGGGA-YAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEK--QPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
RNGNAKP K SG + YAIN+DNF+KRLK LYSHW E ++WG+ + LAIATPP S+DLRYLKSSALN+WL+GYEFP+T+MVFMKKQIHFLCSQKK SLLEV++K AKE VGVEVVMHVK KSDDGT LM +IF A+ S S HDTP+VGHI REAPEG LLE W EKLK DFQL DITNGFS+LFA+KDS E+TNVKKAA+LTSSVMKH+VVPKLEKVIDEEKK+SHS+LMDDTEK IL+PA+ KVKLKAENVDICYPPIFQSGGEFDLRPSASSND++LY+DSTSVIICAIGSRYNSYCSN+ARTFLIDANA+QSKAYEVLL+AHEAAIG LK GNKVSAAYQAAL+VVEKDAPEL+++LTKSAGTGIGLEFRESGLNLN KNDRVLK GMVFNVSLGFQNLQTDT NPKTQK S+LLAD+VIVG PEVVTSISSKAVKDVAYSFNE+++EE+ +PKVKPEANG +A SSKATLRS N E SKEELRRQHQAELARQKNEETARRLAGGGSG+ DNRGA+K +GDL AYKN+NDLP P++LMIQVDQK+EAILLP++GSMVPFH+ATVKSV+SQQDTNRTCYIRIIFNVPGTPF+P+DSN++K+QGSIY+KE SFRS+DPRH SE+VQ IKTLRRQV SRESERAERATLVTQEKLQ+ G +FKPIRL DLWIRP FGGRGRKLTG+LE+HTNGFRYSTSR DER DIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQF+ EVMDVVQT+GGGKRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVNDLWGQPQFKG DLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVELIETPF+VITL EIEIVNLERVGLGQKNFDM +VFKDFKRDV RIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTIT+DPEKFIEDGGWEFLN+E SDS+S+NSQESDQGY PSD QSD+ S EEE DDS SLV+SE+D EEDS+ SEEE+GKTWEELE+EA NAD+E G ESDSEEER RRK+KAFGK+RVP++R GSLPKRP++R
Sbjct: 5 RNGNAKPSDGKASGAASPYAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLKSSALNIWLLGYEFPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGVEVVMHVKAKSDDGTGLMDAIFRAVRANSSS--HDTPVVGHIGREAPEGKLLEMWTEKLKNADFQLSDITNGFSDLFAMKDSTELTNVKKAAFLTSSVMKHFVVPKLEKVIDEEKKVSHSSLMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDAPELVSNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNNPKTQKFSVLLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKATLRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVNDLPPPKELMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRTCYIRIIFNVPGTPFSPHDSNSMKFQGSIYLKEVSFRSKDPRHISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFKPIRLSDLWIRPSFGGRGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQESDQGYEPSDVQSDTGS-EEEGDDSESLVESEDDVEEDSDGDSEEEQGKTWEELEREASNADREKGDESDSEEERKRRKMKAFGKARVPEKRSTRGSLPKRPKLR 1071
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438CFW4 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1855.11 bits (4804), Expect = 0.000e+0
Identity = 890/1070 (83.18%), Postives = 979/1070 (91.50%), Query Frame = 0
Match: A0A438CFW4 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1855.11 bits (4804), Expect = 0.000e+0
Identity = 890/1070 (83.18%), Postives = 979/1070 (91.50%), Query Frame = 0
Query: 4 RNGNAKPPVKKESGGGA-YAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEK--QPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
RNGNAKP K SG + YAIN+DNF+KRLK LYSHW E ++WG+ + LAIATPP S+DLRYLKSSALN+WL+GYEFP+T+MVFMKKQIHFLCSQKK SLLEV++K AKE VGVEVVMHVK KSDDGT LM +IF A+ S S HDTP+VGHI REAPEG LLE W EKLK DFQL DITNGFS+LFA+KDS E+TNVKKAA+LTSSVMKH+VVPKLEKVIDEEKK+SHS+LMDDTEK IL+PA+ KVKLKAENVDICYPPIFQSGGEFDLRPSASSND++LY+DSTSVIICAIGSRYNSYCSN+ARTFLIDANA+QSKAYEVLL+AHEAAIG LK GNKVSAAYQAAL+VVEKDAPEL+++LTKSAGTGIGLEFRESGLNLN KNDRVLK GMVFNVSLGFQNLQTDT NPKTQK S+LLAD+VIVG PEVVTSISSKAVKDVAYSFNE+++EE+ +PKVKPEANG +A SSKATLRS N E SKEELRRQHQAELARQKNEETARRLAGGGSG+ DNRGA+K +GDL AYKN+NDLP P++LMIQVDQK+EAILLP++GSMVPFH+ATVKSV+SQQDTNRTCYIRIIFNVPGTPF+P+DSN++K+QGSIY+KE SFRS+DPRH SE+VQ IKTLRRQV SRESERAERATLVTQEKLQ+ G +FKPIRL DLWIRP FGGRGRKLTG+LE+HTNGFRYSTSR DER DIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQF+ EVMDVVQT+GGGKRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVNDLWGQPQFKG DLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVELIETPF+VITL EIEIVNLERVGLGQKNFDM +VFKDFKRDV RIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTIT+DPEKFIEDGGWEFLN+E SDS+S+NSQESDQGY PSD QSD+ S EEE DDS SLV+SE+D EEDS+ SEEE+GKTWEELE+EA NAD+E G ESDSEEER RRK+KAFGK+RVP++R GSLPKRP++R
Sbjct: 5 RNGNAKPSDGKASGAASPYAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLKSSALNIWLLGYEFPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGVEVVMHVKAKSDDGTGLMDAIFRAVRANSIS--HDTPVVGHIGREAPEGKLLEMWTEKLKNADFQLSDITNGFSDLFAMKDSTELTNVKKAAFLTSSVMKHFVVPKLEKVIDEEKKVSHSSLMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDAPELVSNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNNPKTQKFSVLLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKATLRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVNDLPPPKELMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRTCYIRIIFNVPGTPFSPHDSNSMKFQGSIYLKEVSFRSKDPRHISEVVQMIKTLRRQVASRESERAERATLVTQEKLQLAGTRFKPIRLSDLWIRPSFGGRGRKLTGSLESHTNGFRYSTSRPDERVDIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFFVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKGLDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITEDPEKFIEDGGWEFLNLEVSDSDSENSQESDQGYEPSDVQSDTGS-EEEGDDSESLVESEDDVEEDSDGDSEEEQGKTWEELEREASNADREKGDESDSEEERKRRKMKAFGKARVPEKRSTRGSLPKRPKLR 1071
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BUN3 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1840.47 bits (4766), Expect = 0.000e+0
Identity = 904/1074 (84.17%), Postives = 982/1074 (91.43%), Query Frame = 0
Match: A0A5J5BUN3 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1840.47 bits (4766), Expect = 0.000e+0
Identity = 904/1074 (84.17%), Postives = 982/1074 (91.43%), Query Frame = 0
Query: 1 MAD-RNGNAKPPVKKESGG-GAYAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEK--QPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
MAD RN N+K K SG AYAIN+DNFSKRLK LYSHW+ ++WGA EVLA+ATPPPSEDLRYLKSSALNVWLVGYEFPDT+MVFMKKQIHFLCSQKK SLLEV+K AKE VG EV+MHVK K+DDGTALM SIF A+ QS+ +GHDTP+ GHIAREAPEGNLLETWDEKLK +FQL DITNGFS+LFAVKD+ EITNVKKAAYLTSSVMKH+VVPKLEKVIDEEKK+SHS+LMDDTEKVIL+PAK KVKLKAENVDICYPPIFQSGGEFDL+P+ASSND++LY+DSTSVIICAIGSRYNSYCSN+ARTFLIDAN +QSKAYEVLL+AH+AAI LK GNK AAYQAALS+VEKDAPEL A+LTKSAGTGIGLEFRESGL+LN KNDRVLKAGMVFNVSLGFQNL T+T NPKTQK S LLADTVIV SPEVVTS+SSKAVKDVAYSFNE+++EE+ +PKVK EANG +A SSKATLRSVN E SKEELRRQHQAELARQKNEETARRLAGGGSG DNRG++K SGDL AYKN+NDLP PRDLMIQVDQK+EAILLP++G+MVPFH+ATVKSV+SQQDTNRTCYIRIIFN+PGTPF P+D+NTLK+QGSIY+KE SFRS+DPRH SE+VQ IKTLRRQV SRESE+AERATLVTQEKLQ+ GAKFKPIRL DLWIRP FGGRGRKLTGTLEAHTNGFRYSTSR DER DIM+GN+KHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GGGKRSAYDPDEIEEEQRER RKNKI+MDFQNFVNRVNDLWGQPQFK DLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDM +VFKDFKRDV RIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDS+S+NSQESDQGY PSD QSDS SEEE DDS SLV+SE+D EEDSEE SEE+EGKTWEELE+EA NAD+E G ESDSEEER RRK+KAFGK+R PD+R+P GSLPKR ++R
Sbjct: 1 MADHRNSNSK--TGKASGATSAYAINLDNFSKRLKTLYSHWSGHNDDLWGASEVLAVATPPPSEDLRYLKSSALNVWLVGYEFPDTIMVFMKKQIHFLCSQKKASLLEVVKNSAKEVVGAEVIMHVKGKNDDGTALMDSIFRAVRAQSKLDGHDTPVFGHIAREAPEGNLLETWDEKLKNANFQLSDITNGFSDLFAVKDNAEITNVKKAAYLTSSVMKHFVVPKLEKVIDEEKKVSHSSLMDDTEKVILEPAKVKVKLKAENVDICYPPIFQSGGEFDLKPTASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANGMQSKAYEVLLKAHDAAINALKPGNKAGAAYQAALSIVEKDAPELAANLTKSAGTGIGLEFRESGLSLNGKNDRVLKAGMVFNVSLGFQNLLTETKNPKTQKFSALLADTVIVRETSPEVVTSLSSKAVKDVAYSFNEDDDEEEEERPKVKAEANGAEALSSKATLRSVNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGMADNRGSLKLSGDLIAYKNVNDLPPPRDLMIQVDQKNEAILLPIYGNMVPFHVATVKSVSSQQDTNRTCYIRIIFNIPGTPFTPHDTNTLKFQGSIYMKEVSFRSKDPRHISEVVQLIKTLRRQVASRESEKAERATLVTQEKLQLAGAKFKPIRLSDLWIRPPFGGRGRKLTGTLEAHTNGFRYSTSRPDERVDIMFGNVKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKISMDFQNFVNRVNDLWGQPQFKALDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSDSENSQESDQGYEPSDVQSDSVSEEEA-DDSESLVESEDDEEEDSEEDSEEDEGKTWEELEREASNADREKGDESDSEEERKRRKMKAFGKARAPDKRNPGGSLPKRAKLR 1071
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q782 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1811.96 bits (4692), Expect = 0.000e+0
Identity = 882/1072 (82.28%), Postives = 972/1072 (90.67%), Query Frame = 0
Match: A0A2R6Q782 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1811.96 bits (4692), Expect = 0.000e+0
Identity = 882/1072 (82.28%), Postives = 972/1072 (90.67%), Query Frame = 0
Query: 1 MAD-RNGNAKPPVKKESGGG-AYAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEKQPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
MAD +NGNA+ K SGG AY IN+D+F KRLKMLYSHW+E ++WGA E LAIATPPPSEDLRYLKSSALNVWLVGYEFPDT+MVFMK QIHFLCSQKK SLLEV+KK AK VG EVVMHVK K+DDGTALM SIF A+ QS+ +GHDTP+VG+IAREAPEGNLLETW +KLK FQL DITNGFS+LF VKD EITNVKKAAYLTSSVMKH+VVPKLEKVIDEEKKISHS+LMDDTEK IL+PA+ KVKLKAEN+DICYPPIFQSGG FDL+PSASSND++LY+DSTSVIICAIGSRYNSYCSN+ARTFLIDANA+QSKAYEVLL+AH+AAI LK GNK AYQAALSVVEKDAPE + LTKSAGTGIGLEFRESGLNLN KN+RVLK GMVFNVSLGFQNL T+T NPKTQK ++LLADTVIVG + EV+TSISSKAVKDVAYSFN++++EE+QPKVK A G++ SKATLRSVN + SKEE RRQHQAELARQKNEETARRLAGGGSG DNRGA+K SG+L AYKN+NDLP+PRDLMIQ+DQKHEAILLP++GSMVPFH+A VKSV+SQQDTNR+CYIRIIFNVPGTPFNP+D+N+ K+Q SIY+KE SFRS+DPRH +E+VQ IK+LRRQV SRESE+AERATLVTQEKLQV G+KFKPIRL DLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSR+DER D+M+GN+KHAFFQPAE+EMITL+HFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GG KRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVNDLWGQPQFK DLEFDQP R+LGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDMA+VFKDFKRDVFR+DSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDS+SD+SQESDQGY PSD QSD+ SEEEE +DSASLV+SE+D EE SEE SEE+EGKTWEELE+EA ADKE G ESDSE+ER RRKIKAFGK+RVPD+R+ GSLPKRP+ R
Sbjct: 1 MADHQNGNARTTNGKASGGANAYTINLDSFGKRLKMLYSHWSEYNDDLWGASEALAIATPPPSEDLRYLKSSALNVWLVGYEFPDTIMVFMKTQIHFLCSQKKASLLEVVKKSAKAAVGAEVVMHVKAKNDDGTALMESIFGAVRAQSKLDGHDTPVVGYIAREAPEGNLLETWADKLKNASFQLSDITNGFSDLFGVKDGGEITNVKKAAYLTSSVMKHFVVPKLEKVIDEEKKISHSSLMDDTEKAILEPARIKVKLKAENIDICYPPIFQSGGGFDLKPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHDAAISALKPGNKAGDAYQAALSVVEKDAPEFVGSLTKSAGTGIGLEFRESGLNLNGKNERVLKPGMVFNVSLGFQNLHTETNNPKTQKFAVLLADTVIVGEKNAEVLTSISSKAVKDVAYSFNDDDDEEEQPKVKAVAKGSNGLPSKATLRSVNQD-SKEEQRRQHQAELARQKNEETARRLAGGGSGLADNRGAVKSSGELVAYKNVNDLPSPRDLMIQIDQKHEAILLPIYGSMVPFHVAMVKSVSSQQDTNRSCYIRIIFNVPGTPFNPHDTNSTKFQSSIYVKEVSFRSKDPRHITEVVQLIKSLRRQVASRESEKAERATLVTQEKLQVAGSKFKPIRLTDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRHDERVDVMFGNVKHAFFQPAEREMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGAKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKALDLEFDQPFRDLGFHGVPHKASAFIVPTSSCLVELIETPFVVITLNEIEIVNLERVGLGQKNFDMAIVFKDFKRDVFRMDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSDSDHSQESDQGYEPSDVQSDTGSEEEE-EDSASLVESEDDDEEISEEDSEEDEGKTWEELEREASRADKEKGDESDSEDERKRRKIKAFGKARVPDKRNSGGSLPKRPKFR 1070
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834G6P8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7127136.1}))
HSP 1 Score: 1805.42 bits (4675), Expect = 0.000e+0
Identity = 883/1070 (82.52%), Postives = 969/1070 (90.56%), Query Frame = 0
Match: A0A834G6P8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7127136.1}))
HSP 1 Score: 1805.42 bits (4675), Expect = 0.000e+0
Identity = 883/1070 (82.52%), Postives = 969/1070 (90.56%), Query Frame = 0
Query: 3 DRNGNAKPPVKKESGGGAYAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEK--QPKVKPEANGTDAS-SSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRM 1069
+RNG P K G AY+IN+ F KRLKMLYSHW E ++WGA EVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDT+MVFMKKQIHFLCSQKK SLLEV+KK AKE +G EVVMHVKTKSDDGTALM +IF A+ QS+S+GHDTP+VG+IARE PEGNLLETW EKLK FQL DITNGF++LFAVKDS+EITNVKKAAYLTSSVMKH+VVPKLEKVIDEEKKISHS+LMDDTEKVIL+P+K KVKLKA+N+DICYPPIFQSGG FDL+PSASSND++LY+DSTSVIICAIGSRYNSYCSN+ARTFLIDAN VQSKAYEVLL+AH+AAIG LK GNK AAYQAA+S+VEKDAPE + +LTKSAGTGIGLEFRESGL+LN KNDRVLK GMVFNVSLGFQNLQ +T NP TQ S+LL+DTVIV SPEVVTSISSKAVKDVAYSFNE++EEE+ +PKV+ ANG+ AS SKATLRSVNHE SKEE RRQHQAELARQKNEETARRLAGGGSGSMDNRG ++ SG+L AYK++NDLP PRDL IQ+DQK EAILLP++GSMVPFH+A +KSV+SQQDT+R+CYIRIIFNVPGT FNP+D+N+LK+Q SIYIKE SFRS+DPRH SE+VQ IKTLRRQVTSRESE+AERATLV+QEKLQV GAKFKPIRL DLWIRPVFGGRGRKL+GTLEAHTNGFRYSTSR DER D+M+ NIKHAFFQPAE+EMITLLHFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GGGKRSAYDPDE+EEEQRER RKNKINMDFQNFVNRVNDLWGQ QFK DLEFDQP R+LGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDM +VFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYE RLNLNWRPIL+TITDDPEKFIEDGGWEFLNMEASDS+SDNSQESD GY PSDAQSDS S EEEDDDSASLV+SE+D EE+SEE SEE+EGKTWEELE+EA AD+E G ESDSE ER RR+IK FGK+RVPD+R PSGSLPKRP+
Sbjct: 4 NRNG---PNGKASGGASAYSINLSTFGKRLKMLYSHWKEHNDDLWGASEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTIMVFMKKQIHFLCSQKKASLLEVVKKSAKEVMGAEVVMHVKTKSDDGTALMETIFKAVRAQSKSDGHDTPVVGYIAREVPEGNLLETWAEKLKNSGFQLSDITNGFADLFAVKDSDEITNVKKAAYLTSSVMKHFVVPKLEKVIDEEKKISHSSLMDDTEKVILEPSKVKVKLKADNIDICYPPIFQSGGGFDLKPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANVVQSKAYEVLLKAHDAAIGALKPGNKAGAAYQAAVSIVEKDAPEFVTNLTKSAGTGIGLEFRESGLSLNAKNDRVLKPGMVFNVSLGFQNLQAETKNPNTQNFSVLLSDTVIVTGTSPEVVTSISSKAVKDVAYSFNEDDEEEEEEKPKVRSTANGSKASLPSKATLRSVNHEISKEEQRRQHQAELARQKNEETARRLAGGGSGSMDNRGGVRTSGELIAYKSVNDLPPPRDLAIQIDQKREAILLPIYGSMVPFHVAMIKSVSSQQDTHRSCYIRIIFNVPGTAFNPHDTNSLKFQSSIYIKEVSFRSKDPRHISEVVQLIKTLRRQVTSRESEKAERATLVSQEKLQVAGAKFKPIRLSDLWIRPVFGGRGRKLSGTLEAHTNGFRYSTSRPDERVDVMFANIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEVEEEQRERDRKNKINMDFQNFVNRVNDLWGQTQFKSLDLEFDQPFRDLGFHGVPHKASAFIVPTSSCLVELIETPFVVITLNEIEIVNLERVGLGQKNFDMTIVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYEGRLNLNWRPILRTITDDPEKFIEDGGWEFLNMEASDSDSDNSQESDHGYEPSDAQSDSGS-EEEDDDSASLVESEDDDEEESEEGSEEDEGKTWEELEREASRADREKGDESDSENERKRRQIKTFGKARVPDKRIPSGSLPKRPKF 1069
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RFV8 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1803.11 bits (4669), Expect = 0.000e+0
Identity = 883/1072 (82.37%), Postives = 968/1072 (90.30%), Query Frame = 0
Match: A0A2R6RFV8 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1803.11 bits (4669), Expect = 0.000e+0
Identity = 883/1072 (82.37%), Postives = 968/1072 (90.30%), Query Frame = 0
Query: 1 MAD-RNGNAKPPVKKESGGG-AYAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEKQPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
MAD +NGNA+ K SGG AYAIN+D+F KRLKMLYSHW E ++WG E LAIATPPPSEDLRYLKSSALNVWLVGYEFPDT+MVFMK QIHFLCSQKK SLLEV+KK AKE VG EVVMHVK K+DDGTALM SIF A+ QS+ +GHDTP+VG+IAREAPEGNLLETW +KLK FQL DITNGFS+LF VKD EITNVKKAAYLTSSVMKH+VVP LEKVIDEEKKISHS+LMDDTEK IL+PA+ KVKLKAEN+DICYPPIFQSGG FDL+PSASSND++LY+DSTSVIICAIGSRYNSYCSN+ARTFLIDANA+QSKAYEVLL+AH+AAI LK GNK AYQAALSVVEKDAPE +A LTKSAGTGIGLEFRESG NLN KN+RVLK GMVFNVSLGFQNLQT T NPKTQK ++LLADTVIVG EV+TSI+SKAVKDVAYSFN+++EEE QPKVK + G++A SKATLRSVN + SKEE RRQHQAELARQKNEETARRLAGGGSG DNRGA+K SG+L YKN+NDLP+PRDLMIQ+DQKHEAILLP++GSMVPFH+A VKSV+SQQDTNR+CYIRIIFNVPGTPFNP+D+N+ K+Q SIY+KE SFRS+DPRH +E+VQ IK+LRRQV SRESE+AERATLVTQEKLQV G KFKPIRL DLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSR+DER D+M+GN+KHAFFQPAE+EMITL+HFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GG KRSAYDPDEIEEEQRER RKNKINMDFQNFVNRVNDLWGQPQFK DLEFDQP R+LGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDM +VFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYES LNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDS+SD+SQESDQGY PSD QSD+ SEEEE +DSASLV+SE+D EE SEE EE+EGKTWEELE+EA ADKE GAESDSE+ER RRKIKAFGK+RVPD+R+PSGSLPKRP+ R
Sbjct: 1 MADHQNGNARTTNGKASGGASAYAINLDSFGKRLKMLYSHWNEYNDDLWGTSEALAIATPPPSEDLRYLKSSALNVWLVGYEFPDTIMVFMKTQIHFLCSQKKASLLEVVKKSAKEAVGAEVVMHVKAKNDDGTALMESIFGAVRAQSKLDGHDTPVVGYIAREAPEGNLLETWADKLKNASFQLSDITNGFSDLFGVKDGGEITNVKKAAYLTSSVMKHFVVPTLEKVIDEEKKISHSSLMDDTEKAILEPARIKVKLKAENIDICYPPIFQSGGGFDLKPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHDAAISALKPGNKAGDAYQAALSVVEKDAPEFVASLTKSAGTGIGLEFRESGFNLNGKNERVLKPGMVFNVSLGFQNLQTQTNNPKTQKFAVLLADTVIVGEKHAEVLTSITSKAVKDVAYSFNDDDEEE-QPKVKAVSKGSNALPSKATLRSVNQD-SKEEQRRQHQAELARQKNEETARRLAGGGSGLADNRGAVKSSGELVPYKNVNDLPSPRDLMIQIDQKHEAILLPIYGSMVPFHVAMVKSVSSQQDTNRSCYIRIIFNVPGTPFNPHDANSSKFQSSIYVKEVSFRSKDPRHITEVVQLIKSLRRQVASRESEKAERATLVTQEKLQVAGTKFKPIRLTDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRHDERVDVMFGNVKHAFFQPAEREMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGAKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKALDLEFDQPFRDLGFHGVPHKASAFIVPTSSCLVELIETPFVVITLNEIEIVNLERVGLGQKNFDMTIVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESSLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSDSDHSQESDQGYEPSDVQSDTGSEEEE-EDSASLVESEDDDEEVSEEDLEEDEGKTWEELEREASRADKEKGAESDSEDERKRRKIKAFGKARVPDKRNPSGSLPKRPKFR 1069
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2H5Q2Q7 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1796.17 bits (4651), Expect = 0.000e+0
Identity = 862/1070 (80.56%), Postives = 968/1070 (90.47%), Query Frame = 0
Match: A0A2H5Q2Q7 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1796.17 bits (4651), Expect = 0.000e+0
Identity = 862/1070 (80.56%), Postives = 968/1070 (90.47%), Query Frame = 0
Query: 4 RNGNAKPPVKKESGGGA---YAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEKQPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
+N KP K SG A YAIN+DNFSKRLKMLYSHWTE ++WG LA+ATPP SEDLRYLKSSALNVWLVGYEFP+T+MVF+KKQIHFLCSQKK SLLEV+KK AKE VG+EVV+HVK K+DDG+ LM IF A++ QS+S G ++P+VGHI+REAPEG LLETW+EKLK +F L D++NGFS+LFA+KD E+TN+KKAA+L+SSVMK +VVPKLEKVIDEEKK+SHS+LMD+TEK IL+PA+ KVKLKAENVDICYPPIFQSGGEFDL+PSASSND +LY+DSTSVIICA+GSRYNSYCSN+ARTFLIDAN VQSKAYEVLL+AHEAAI LKSGNKVSAAY+AA +VVEKDAPEL A+LT++AGTGIGLEFRESGL+LN KNDR+LKAGMVFNVSLGFQNLQT+ NPKTQK S+LLADTVIVG P++VTS SSKAVKDVAYSFNE++EEE+QPKVK E G + + SKATLRS + E SKEELRRQHQAELARQKNEETARRLAGGGS + DNRG++K GDL AYKN+NDLP PRDLMIQVDQK+EAILLP++GSMVPFH+ATVKSV+SQQDTNR+CYIRIIFNVPGT F P+DSN+LK+QGSIY+KE S RS+D RH SE+VQQIKTLRRQVTSRESERAERATLVTQEKLQ+ AKFKP++L DLWIRP FGGRGRKLTG+LEAHTNGFRYSTSR DER D+MYGNIKHAFFQPAE+EMITLLHFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GGGKRSAYDPDE+EEEQRERARKNKINMDFQNFVNRVNDLWGQPQFK DLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDM +VFKDFKRDV RIDSIPS+SLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSES+NSQ+SDQGY PSD QSDS S ++E+DDS SLV+SE+D EEDSEE SEE++GKTWEELE+EA AD+E GA+SDSE+ER RRK+KAFGK+R P++R+P GSLPKR ++R
Sbjct: 5 QNSTVKPAAGKPSGNAAANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPPPRDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSNSLKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESENSQDSDQGYEPSDVQSDSVS-DDENDDSESLVESEDDEEEDSEEDSEEDKGKTWEELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAKLR 1073
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067DUX1 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1796.17 bits (4651), Expect = 0.000e+0
Identity = 862/1070 (80.56%), Postives = 968/1070 (90.47%), Query Frame = 0
Match: A0A067DUX1 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1796.17 bits (4651), Expect = 0.000e+0
Identity = 862/1070 (80.56%), Postives = 968/1070 (90.47%), Query Frame = 0
Query: 4 RNGNAKPPVKKESGGGA---YAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEKQPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
+N KP K SG A YAIN+DNFSKRLKMLYSHWTE ++WG LA+ATPP SEDLRYLKSSALNVWLVGYEFP+T+MVF+KKQIHFLCSQKK SLLEV+KK AKE VG+EVV+HVK K+DDG+ LM IF A++ QS+S G ++P+VGHI+REAPEG LLETW+EKLK +F L D++NGFS+LFA+KD E+TN+KKAA+L+SSVMK +VVPKLEKVIDEEKK+SHS+LMD+TEK IL+PA+ KVKLKAENVDICYPPIFQSGGEFDL+PSASSND +LY+DSTSVIICA+GSRYNSYCSN+ARTFLIDAN VQSKAYEVLL+AHEAAI LKSGNKVSAAY+AA +VVEKDAPEL A+LT++AGTGIGLEFRESGL+LN KNDR+LKAGMVFNVSLGFQNLQT+ NPKTQK S+LLADTVIVG P++VTS SSKAVKDVAYSFNE++EEE+QPKVK E G + + SKATLRS + E SKEELRRQHQAELARQKNEETARRLAGGGS + DNRG++K GDL AYKN+NDLP PRDLMIQVDQK+EAILLP++GSMVPFH+ATVKSV+SQQDTNR+CYIRIIFNVPGT F P+DSN+LK+QGSIY+KE S RS+D RH SE+VQQIKTLRRQVTSRESERAERATLVTQEKLQ+ AKFKP++L DLWIRP FGGRGRKLTG+LEAHTNGFRYSTSR DER D+MYGNIKHAFFQPAE+EMITLLHFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GGGKRSAYDPDE+EEEQRERARKNKINMDFQNFVNRVNDLWGQPQFK DLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDM +VFKDFKRDV RIDSIPS+SLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSES+NSQ+SDQGY PSD QSDS S ++E+DDS SLV+SE+D EEDSEE SEE++GKTWEELE+EA AD+E GA+SDSE+ER RRK+KAFGK+R P++R+P GSLPKR ++R
Sbjct: 5 QNSTVKPAAGKPSGNAAANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPPPRDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSNSLKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESENSQDSDQGYEPSDVQSDSVS-DDENDDSESLVESEDDEEEDSEEDSEEDKGKTWEELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAKLR 1073
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: V4SRC9 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1795.02 bits (4648), Expect = 0.000e+0
Identity = 861/1070 (80.47%), Postives = 968/1070 (90.47%), Query Frame = 0
Match: V4SRC9 (FACT complex subunit {ECO:0000256|RuleBase:RU367052})
HSP 1 Score: 1795.02 bits (4648), Expect = 0.000e+0
Identity = 861/1070 (80.47%), Postives = 968/1070 (90.47%), Query Frame = 0
Query: 4 RNGNAKPPVKKESGGGA---YAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEKQPKVKPEANGTDASSSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
+N KP K SG A YAIN+DNFSKRLKMLYSHWTE ++WG LA+ATPP SEDLRYLKSSALNVWLVGYEFP+T+MVF+KKQIHFLCSQKK SLLEV+KK AKE VG+EVV+HVK K+DDG+ LM IF A++ QS+S G ++P+VGHI+REAPEG LLETW+EKLK +F L D++NGFS+LFA+KD E+TN+KKAA+L+SSVMK +VVPKLEKVIDEEKK+SHS+LMD+TEK IL+PA+ KVKLKAENVDICYPPIFQSGGEFDL+PSASSND +LY+DSTSVIICA+GSRYNSYCSN+ARTFLIDAN VQSKAYEVLL+AHEAAI LKSGNKVSAAY+AA +VVEKDAPEL A+LT++AGTGIGLEFRESGL+LN KNDR+LKAGMVFNVSLGFQNLQT+ NPKTQK S+LLADTVIVG P++VTS SSKAVKDVAYSFNE++EEE+QPKVK E G + + SKATLRS + E SKEELRRQHQAELARQKNEETARRLAGGGS + DNRG++K GDL AYKN+NDLP PRDLMIQVDQK+EAILLP++GSMVPFH+ATVKSV+SQQDTNR+CYIRIIFNVPGT F P+DSN+LK+QGSIY+KE S RS+D RH SE+VQQIKTLRRQVTSRESERAERATLVTQEKLQ+ AKFKP++L DLWIRP FGGRGRKLTG+LEAHTNGFRYSTSR DER D+MYGNIKHAFFQPAE+EMITLLHFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GGGKRSAYDPDE+EEEQRERARKNKINMDFQNFVNRVNDLWGQPQFK DLEFDQPLRELGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDM +VFKDFKRDV RIDSIPS+SLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSES+NSQ+SDQGY PSD QSDS S ++E+DDS SLV+SE+D EEDSEE SEE++GK+WEELE+EA AD+E GA+SDSE+ER RRK+KAFGK+R P++R+P GSLPKR ++R
Sbjct: 5 QNSTVKPAAGKPSGNAAANTYAINLDNFSKRLKMLYSHWTEHNSDLWGDSNALAVATPPVSEDLRYLKSSALNVWLVGYEFPETIMVFLKKQIHFLCSQKKASLLEVIKKSAKEAVGIEVVIHVKGKTDDGSGLMDKIFGAVNDQSKSGGQNSPVVGHISREAPEGKLLETWNEKLKKANFALSDVSNGFSDLFAIKDDTELTNIKKAAFLSSSVMKQFVVPKLEKVIDEEKKVSHSSLMDETEKAILEPARIKVKLKAENVDICYPPIFQSGGEFDLKPSASSNDNYLYYDSTSVIICAVGSRYNSYCSNVARTFLIDANTVQSKAYEVLLKAHEAAISALKSGNKVSAAYKAASTVVEKDAPELAANLTRNAGTGIGLEFRESGLSLNAKNDRILKAGMVFNVSLGFQNLQTENKNPKTQKFSVLLADTVIVGEKVPDIVTSKSSKAVKDVAYSFNEDDEEEEQPKVKAEVKGGEPTLSKATLRSDHQEMSKEELRRQHQAELARQKNEETARRLAGGGSSTADNRGSVKTIGDLVAYKNVNDLPPPRDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDTNRSCYIRIIFNVPGTSFTPHDSNSLKFQGSIYLKEVSLRSKDSRHISEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLASAKFKPLKLFDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMYGNIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYIEVMDVVQTLGGGKRSAYDPDEVEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKAFDLEFDQPLRELGFHGVPHKASAFIVPTSSCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSSSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESENSQDSDQGYEPSDVQSDSVS-DDENDDSESLVESEDDEEEDSEEDSEEDKGKSWEELEREASYADREKGADSDSEDERKRRKMKAFGKARAPEKRNPGGSLPKRAKLR 1073
BLAST of XM_017371068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4LD29 (FACT complex subunit {ECO:0000256|RuleBase:RU367052} (Fragment))
HSP 1 Score: 1790.78 bits (4637), Expect = 0.000e+0
Identity = 884/1070 (82.62%), Postives = 970/1070 (90.65%), Query Frame = 0
Match: A0A6A4LD29 (FACT complex subunit {ECO:0000256|RuleBase:RU367052} (Fragment))
HSP 1 Score: 1790.78 bits (4637), Expect = 0.000e+0
Identity = 884/1070 (82.62%), Postives = 970/1070 (90.65%), Query Frame = 0
Query: 3 DRNGNAKPPVKKESGGGAYAINIDNFSKRLKMLYSHWTESRHEIWGACEVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTVMVFMKKQIHFLCSQKKVSLLEVLKKPAKETVGVEVVMHVKTKSDDGTALMGSIFLAIHGQSRSEGHDTPIVGHIAREAPEGNLLETWDEKLKGEDFQLVDITNGFSELFAVKDSNEITNVKKAAYLTSSVMKHYVVPKLEKVIDEEKKISHSTLMDDTEKVILDPAKAKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDQHLYFDSTSVIICAIGSRYNSYCSNIARTFLIDANAVQSKAYEVLLRAHEAAIGTLKSGNKVSAAYQAALSVVEKDAPELIAHLTKSAGTGIGLEFRESGLNLNNKNDRVLKAGMVFNVSLGFQNLQTDTMNPKTQKISLLLADTVIVGVNSPEVVTSISSKAVKDVAYSFNEEEEEEK-QPKVKPEANGTDAS-SSKATLRSVNHETSKEELRRQHQAELARQKNEETARRLAGGGSGSMDNRGAMKGSGDLNAYKNINDLPTPRDLMIQVDQKHEAILLPVHGSMVPFHIATVKSVTSQQDTNRTCYIRIIFNVPGTPFNPYDSNTLKYQGSIYIKEASFRSRDPRHSSEIVQQIKTLRRQVTSRESERAERATLVTQEKLQVGGAKFKPIRLLDLWIRPVFGGRGRKLTGTLEAHTNGFRYSTSRNDERADIMYGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYAEVMDVVQTIGGGKRSAYDPDEIEEEQRERARKNKINMDFQNFVNRVNDLWGQPQFKGHDLEFDQPLRELGFHGVPHKSSAFIVPTSSCLVELIETPFVVITLVEIEIVNLERVGLGQKNFDMAVVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSESDNSQESDQGYVPSDAQSDSASEEEEDDDSASLVDSEEDGEEDSEEVSEEEEGKTWEELEKEAVNADKENGAESDSEEERARRKIKAFGKSRVPDRRHPSGSLPKRPRMR 1070
+RNG+ K G Y+IN+ F KRLKMLYSHW E ++WGA +VLAIATPPPSEDLRYLKSSALNVWLVGYEFPDT+MVFMKKQIHFLCSQKK SLLEV+KK AKE +G EVV+HVKTKSDDGTALM +IF A+ QS+S+GHDTP+VG+IARE PEGNLLETW EKLK DFQL DITNGFS+LFAVKDS+EITNVKKAAYLTSSVMKH+VVPKLEKVIDEEKKISHS+LMDDTEKVIL+PAK KVKLKA+N+DICYPPIFQSGG FDL+PSASSND++LY+DSTSVIICAIGSRYNSYCSN+ARTFLIDANAVQSKAYEVLL+AH+AAIG LK GNK +AAYQAA+SVVEKDAPE + +LTKSAGTGIGLEFRESGL+LN KNDRVLK GMVFNVSLGFQNLQ +T NPKTQ S+LL+DTVIV SPEVVTSISSKAVKDVAYSFNE++EEE+ +PKV+ ANG+ AS SKATLRSVN E SKEE RRQHQAELARQKNEETARRLAGGGSGSMDNRG ++ SG+L AYK++NDLP PRDL IQ+DQK EAILLP++GSMVPFH+A +KSV+SQQDTNR+CYIRIIFNVPGT FNP+D+N+LK+Q SIY+KE SFRS+DPRH SE+VQ IKTLRRQVTSRESE+AERATLV+QEKLQV GAKFKPIRL DLWIRPVFGGRGRKL GTLEAH NGFRYSTSR DER D+M+ NIKHAFFQPAE+EMITLLHFHLHNHIMVGNKKTKDVQFY EVMDVVQT+GGGKRSAYDPDE+EEEQRER RKNKINMDFQNFVNRVNDLWGQ QFK DLEFDQP R+LGFHGVPHK+SAFIVPTSSCLVELIETPFVVITL EIEIVNLERVGLGQKNFDM +VFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDS+SDNSQESD GY PSDAQSDS S EEED+DSASLV+SE++ EE+SEEVSEE+EGKTWEELE+EA AD+E G ESDSE ER RR+IK FGK+RVPD R PSGSLPKR + R
Sbjct: 4 NRNGSNG---KASGGASVYSINLSTFGKRLKMLYSHWKEHNDDLWGASDVLAIATPPPSEDLRYLKSSALNVWLVGYEFPDTIMVFMKKQIHFLCSQKKASLLEVVKKSAKEVMGAEVVVHVKTKSDDGTALMETIFKAVRAQSKSDGHDTPVVGYIAREVPEGNLLETWAEKLKNSDFQLSDITNGFSDLFAVKDSDEITNVKKAAYLTSSVMKHFVVPKLEKVIDEEKKISHSSLMDDTEKVILEPAKVKVKLKADNIDICYPPIFQSGGGFDLKPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANAVQSKAYEVLLKAHDAAIGALKPGNKAAAAYQAAVSVVEKDAPEFVTNLTKSAGTGIGLEFRESGLSLNAKNDRVLKPGMVFNVSLGFQNLQAETKNPKTQNFSVLLSDTVIVNGTSPEVVTSISSKAVKDVAYSFNEDDEEEEEKPKVRSAANGSKASLPSKATLRSVNQEISKEEQRRQHQAELARQKNEETARRLAGGGSGSMDNRGGVRSSGELIAYKSVNDLPPPRDLAIQIDQKREAILLPIYGSMVPFHVAMIKSVSSQQDTNRSCYIRIIFNVPGTAFNPHDANSLKFQSSIYVKEVSFRSKDPRHISEVVQLIKTLRRQVTSRESEKAERATLVSQEKLQVAGAKFKPIRLSDLWIRPVFGGRGRKLAGTLEAHANGFRYSTSRPDERVDVMFANIKHAFFQPAEREMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEVEEEQRERDRKNKINMDFQNFVNRVNDLWGQTQFKSLDLEFDQPFRDLGFHGVPHKASAFIVPTSSCLVELIETPFVVITLNEIEIVNLERVGLGQKNFDMTIVFKDFKRDVFRIDSIPSTSLDGIKEWLDTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEASDSDSDNSQESDHGYEPSDAQSDSGS-EEEDNDSASLVESEDEDEEESEEVSEEDEGKTWEELEREASKADREKGDESDSENERKRRQIKTFGKARVPDNRIPSGSLPKRHKFR 1069
| Match Name | Stats | Description |
|---|---|---|
| F6I4V8 | E-Value: 0.000e+0, PID: 83.18 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| A0A438CFW4 | E-Value: 0.000e+0, PID: 83.18 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| A0A5J5BUN3 | E-Value: 0.000e+0, PID: 84.17 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| A0A2R6Q782 | E-Value: 0.000e+0, PID: 82.28 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| A0A834G6P8 | E-Value: 0.000e+0, PID: 82.52 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7127... [more] |
| A0A2R6RFV8 | E-Value: 0.000e+0, PID: 82.37 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| A0A2H5Q2Q7 | E-Value: 0.000e+0, PID: 80.56 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| A0A067DUX1 | E-Value: 0.000e+0, PID: 80.56 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| V4SRC9 | E-Value: 0.000e+0, PID: 80.47 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
| A0A6A4LD29 | E-Value: 0.000e+0, PID: 82.62 | FACT complex subunit {ECO:0000256|RuleBase:RU36705... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |