XM_017371261.1

Resource Type: 
Polypeptide
Name: 
XM_017371261.1
Identifier: 
XM_017371261.1-protein
Sequence: 
MPSSAIPSSWSSHNRPELLIARLRSAGEGRLKALRELKNQIIGNRTKKLT
YIKLGAVPSVVEILTSAVFDTSGDVHSILIQSCAVLGSFACGVDAGVKAV
LEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEF
ILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSL
SQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLL
ACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSF
ISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLEC
CRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKT
ELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLV
QLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPK
PSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLI
QGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVA
AVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTA
LGQTMTFDASVV
Sequence Length: 
662
Sequence Checksum: 
0859e982fd9f44e21a99ff5d29f36a0f
View location in JBrowse: 
DCARv2_Chr9:18183622..18191031+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017371261.1, derives from mRNA, XM_017371261.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AEE8 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 923.309 bits (2385), Expect = 0.000e+0
Identity = 469/654 (71.71%), Postives = 550/654 (84.10%), Query Frame = 0
 
Query:    6 IPSSWSSHNRPELLIARLRSA--GEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTS-GDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMT 656
            +P+S S+H  PE LI RL SA  GE +LKALRELKNQIIGNRTKK +YIKLGAVPSVV IL+SAV     G  +S+L+QS A +GSFACGVDAGVKAVL+AGAF HL+ LISH NDKVVDA ARSLRMIYQSKLAPKYDFL  +N+EF+LSLLN  NENVTGLGASIITHSC + +EQ+ALSDAG+LKKL+SLL GSLSQRDASLE+LA++ K+NP+ ISKFVG ESGRALSAV ELTKD+YPRTRLLAC+CLIV++++ P  LQ  GIK KLI ILLEL+DDPG+VGD+A FALSS I+E EDLQKLAFEANVVD+LC+HL+   +Q +R+QGILL+LA LCSKLE CRS++ S +  NL+ DAL H+ ++VR AACICLKS+SRSV++L AGHF  E++I+ L++LL DTSTS QVA LGAISNIV+DFA  KS  ++CGGVKQLVQLSKSMDST+RVNAVWALRNL FL DN CKEGIF ELT  TL SLI D +PSVQEQAL LVRNLVDG ++S+EY+F ED L+L+ VG+QL SASK EVLIQGM+VL NV+SG EFHKEAVMH+L   A   T SI++KFLQ++DS+LR AAVWA+VNLT PSSPGAF RVV+LRNAG+V QLK M+ DPCLDVKLRVRTAL Q  T
Sbjct:    1 MPASASTHG-PEDLIGRLSSATDGEAKLKALRELKNQIIGNRTKKFSYIKLGAVPSVVSILSSAVSGYGDGYSNSLLVQSAAAIGSFACGVDAGVKAVLDAGAFPHLLSLISHPNDKVVDAGARSLRMIYQSKLAPKYDFLQEENMEFLLSLLNSENENVTGLGASIITHSCETSIEQKALSDAGILKKLISLLGGSLSQRDASLEALATIFKENPKAISKFVGTESGRALSAVIELTKDKYPRTRLLACICLIVIRNTFPCYLQDVGIKTKLILILLELLDDPGQVGDDAAFALSSLIAEKEDLQKLAFEANVVDKLCNHLRKGPVQAKRFQGILLSLADLCSKLESCRSRLLSLQVLNLVTDALIHDSADVRAAACICLKSVSRSVKNLCAGHFVNEVLIIRLIQLLHDTSTSVQVAVLGAISNIVVDFATCKSTFIQCGGVKQLVQLSKSMDSTVRVNAVWALRNLTFLKDNRCKEGIFLELTVSTLSSLIHDYEPSVQEQALALVRNLVDGCIESVEYVFAEDSLILHAVGKQLQSASKAEVLIQGMYVLSNVASGKEFHKEAVMHELFPQAGNSTQSIIIKFLQSNDSRLRTAAVWAVVNLTFPSSPGAFGRVVKLRNAGIVSQLKNMINDPCLDVKLRVRTALEQFTT 653
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZSE1 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 912.138 bits (2356), Expect = 0.000e+0
Identity = 478/656 (72.87%), Postives = 556/656 (84.76%), Query Frame = 0
 
Query:    6 IPSSWSSHNRPELLIARLRSA---GEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTS-GDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            +P+S S+H RPE LI RL S    GE +LKALRELKNQIIGNRTKK +YIKLGAVPS+V IL+SA      GD +S+L+QS A +GSFACGVDAGVKAVL+AGAF HL+ LISH NDKVVDA ARSLRMIYQSKLAPKYDFL  KN+EF+LSLLN  NENVTGLGASIITHSC +  EQ+ALSDAG+LKKL SLL GSLSQRDASLE+LA++ K+NP+VISKFVGPESGRALSAV ELTKD+YPRTRLLACMCLIV++++SP  LQ  GIK+KLI ILLEL+DDPG+VGD+A FALS+ I+E EDLQKLAFEANVVD+LC+HLQ   +Q +R+QGIL ALA LCSKLE CRS++ S +  NL+ DAL H+ ++VR AACICLK++SRSV++LSAGHF  E+II+PLV+LL DTSTS QVAALGAISNIV+DF+ HKS  ++CGGVKQLVQLSKSMDST+RVNAV ALRNLMFL D  CKEGIFSELTA TL SLI D + SVQEQAL LVRNLVDG +DS+E++F ED L+L+ VGRQL SASK EVLIQGM+VL NV+SG EFHKEAVM++L   A   T SI+VKFLQ++DS+LR AAVWA+VNLT PSSPGAF RVV+LRNAG+  QLK MV D CLDVKLRV+TALGQ+M F
Sbjct:    1 MPASASTH-RPEALIGRLSSIATDGEAKLKALRELKNQIIGNRTKKFSYIKLGAVPSIVSILSSAASGYGDGDSNSLLVQSAAAIGSFACGVDAGVKAVLDAGAFPHLLSLISHPNDKVVDAGARSLRMIYQSKLAPKYDFLQEKNMEFLLSLLNSENENVTGLGASIITHSCETSTEQKALSDAGILKKLSSLLGGSLSQRDASLEALATIFKENPKVISKFVGPESGRALSAVIELTKDKYPRTRLLACMCLIVIRNTSPWYLQDVGIKIKLILILLELLDDPGQVGDDAAFALSNLIAEKEDLQKLAFEANVVDKLCNHLQKGPIQAKRFQGILRALADLCSKLESCRSRLLSLQVLNLVTDALIHDSADVRAAACICLKNVSRSVKNLSAGHFMNEIIIIPLVQLLHDTSTSVQVAALGAISNIVVDFSTHKSTFIQCGGVKQLVQLSKSMDSTVRVNAVCALRNLMFLKDYGCKEGIFSELTASTLTSLIHDHESSVQEQALALVRNLVDGCIDSVEHVFAEDSLILHAVGRQLQSASKAEVLIQGMYVLSNVASGKEFHKEAVMYELFPQAGNSTQSIMVKFLQSNDSRLRTAAVWAVVNLTFPSSPGAFGRVVKLRNAGIFSQLKNMVNDHCLDVKLRVKTALGQSMIF 655
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A118K5N2 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 910.983 bits (2353), Expect = 0.000e+0
Identity = 456/660 (69.09%), Postives = 538/660 (81.52%), Query Frame = 0
 
Query:    6 IPSSWSSHNRPELLIARLRSA----GEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTSGDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIF-SHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLM---TPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            +P S SS +RPE LI RLRSA    GE +LK LRELKNQIIGNRTKKL+YIKLGAVP VV IL+SA          +L+Q  A +GSFACGVDAGVKAVL+ GAF HL+ L+SH N+KVVDA AR+L+MIYQSK+APKYDF   KN+EF++SLL+K NENVTGLGASIITHSC +  EQ+ L DAGVLKKL+ LL G+ SQRDASLES A++IK+NPEVISKFVGPE+GR    + ELTKDRYPRTRLLAC+CLI++++++P+ LQ  GI+ KLI +LLEL+DDPG+VGDEA   LSSFI++ E LQKLAFEA+ +D+LCDHLQ  LLQ +R QGI + LA LCS LECCRS I  S KA N++  AL H  ++VRVAACICLK++SRSV++LSAGHF TE +IMPL++LL DTSTS QVAAL  ISN+V+DF MHKSL V+ GGVKQLVQLSKSMDST+R+NAVWALRNLMFLVD+ CKEGIF EL A+TL SL+CDP  SVQEQAL LV NLV+G VDSIEY+F ED LLLN VGRQL SASK EVLIQGM+VLCNV+SG EFHKEAVM QL+     ++ DT SI+V+ LQ+  +QLR AAVW +VNLT P+  GA ARVV+LRNAG+V QLK MV DPCLDVKLRVRTALGQ+MTF
Sbjct:    1 MPGSASSTHRPEGLIERLRSAAADGGEAKLKVLRELKNQIIGNRTKKLSYIKLGAVPFVVSILSSASSSAD----CLLVQCAATIGSFACGVDAGVKAVLDTGAFPHLINLLSHPNEKVVDAGARALKMIYQSKVAPKYDFFEEKNMEFLISLLDKNNENVTGLGASIITHSCETNDEQKILGDAGVLKKLIDLLGGTTSQRDASLESFATIIKENPEVISKFVGPENGRTWGTLIELTKDRYPRTRLLACVCLILIKNAAPSYLQSVGIRTKLILVLLELIDDPGQVGDEAVLTLSSFIADDEGLQKLAFEASTIDKLCDHLQKELLQAKRLQGIFMTLANLCSNLECCRSIILQSPKALNIVTAALTHATADVRVAACICLKNISRSVKYLSAGHFMTEAVIMPLIQLLYDTSTSVQVAALCTISNLVVDFTMHKSLFVQSGGVKQLVQLSKSMDSTVRLNAVWALRNLMFLVDSRCKEGIFMELRALTLTSLVCDPSASVQEQALALVCNLVNGPVDSIEYVFTEDGLLLNAVGRQLWSASKHEVLIQGMYVLCNVASGQEFHKEAVMQQLLPQPQASNEDTQSIMVRMLQSDVAQLRTAAVWTIVNLTIPTGAGALARVVKLRNAGIVSQLKNMVNDPCLDVKLRVRTALGQSMTF 656
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7SL42 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 900.197 bits (2325), Expect = 0.000e+0
Identity = 449/655 (68.55%), Postives = 539/655 (82.29%), Query Frame = 0
 
Query:    6 IPSSWSSHNRPELLIARLRSA---GEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTSGDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            +P+S S+H RPE L+ RLRSA    + +LKALRE+KNQIIGNRTKKL+YIKLGAVP+VV ++ +    T+ D  S+L+QS A +GSFACG +AGV+AVL AGAF HL+ L+S+ N KVVDA ARSLRMIYQSKLAPKYDFL  KN+EF+LSLLN  NENVTGLGASIITHSC +  EQ AL DAGVLKKL+ LL+GSLSQRDASLES+A++IK NPEV+SKFVGPE+GRALSAVTELTKDRYPRTRLLACMCLIVV+++SP  LQ   I+ KLI ILLEL+DDPG+VGDEA FALSS I+E EDLQKLAFE N +D+LC+HLQ   LQ +R+QGILLALA LCSKLE CRS+  + +  N +IDAL H+  EVR AACICL+S+SRSV++LSAG+F  E +++PLV+LL DTSTS QVAALGAISNIV+DF   KS+ ++CGGVKQLVQLSKSMD TIR+N+VW LRNLMFL DN CKEGIF ELTA  L SLICDP+PSVQ QALGLV NLVDG ++S+EY+F+ED ++L  VG+QL S  K EV IQGM+VL NV++GNEFHKEAVMHQL   A   T  I++KFLQ++DS+LR AAVW ++NLT P S GA+ R V+L +AG++ Q+K M  DPCLDVKLRVRT LGQ++TF
Sbjct:    1 MPTSASTH-RPEDLLTRLRSANADADAKLKALREVKNQIIGNRTKKLSYIKLGAVPAVVSVIAA----TADDCSSVLVQSAAAIGSFACGFEAGVQAVLRAGAFPHLLRLLSNSNGKVVDAGARSLRMIYQSKLAPKYDFLQEKNMEFLLSLLNSENENVTGLGASIITHSCETSAEQNALCDAGVLKKLIGLLQGSLSQRDASLESIATVIKSNPEVVSKFVGPENGRALSAVTELTKDRYPRTRLLACMCLIVVRNTSPGCLQDLAIRTKLILILLELLDDPGQVGDEASFALSSLIAEKEDLQKLAFEGNAIDKLCNHLQKGSLQAKRFQGILLALADLCSKLENCRSRFLALQVMNSVIDALTHDSGEVRAAACICLRSVSRSVKNLSAGNFMNETVVIPLVQLLSDTSTSVQVAALGAISNIVVDFTTRKSIFMQCGGVKQLVQLSKSMDPTIRLNSVWGLRNLMFLADNRCKEGIFLELTASLLASLICDPEPSVQVQALGLVCNLVDGCINSVEYVFVEDSIILQAVGKQLQSTLKAEVGIQGMYVLSNVATGNEFHKEAVMHQLFPQAGNSTQPIIIKFLQSNDSRLRTAAVWTVLNLTFPGSLGAYGRFVKLCSAGILSQIKNMANDPCLDVKLRVRTVLGQSLTF 650
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PQT4 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 899.427 bits (2323), Expect = 0.000e+0
Identity = 462/664 (69.58%), Postives = 541/664 (81.48%), Query Frame = 0
 
Query:    6 IPSSWSSHNRPELLIARLRSA---GEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSA-----VFDTSGDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSV----QHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            +P+S S+H RPE LI+RLRSA   G   LKALRELKNQIIGNRTKKL+YIKLGAVPSVV IL SA       D   D  ++L+QS A +GSFACG DAGVKAV++AGAF HL+ LISH NDKVVDA ARSL+MIYQSKLAPKYDFL  KN+ F+LSLLN  NENVTGLGASIITHSC + +EQ+ALSDAGVLK+L+ L+ GSL QRDASLESL ++IK NPEV+SKF+GPESGRAL+AVTELTKDR PRTRLLACMC+IV++++ P  LQ  G K KL+ ILLEL+DDPG+VGDEA FALSS I+E E+LQKLAFE NVVD+LC+HL+   LQ +R QGILLALA LCSKLE CRS++ S +  +++ DAL+H+ + VR AAC+CLKS++RSV    Q+LSAG F  E+I++PLV+LL DTSTS QVAALGAISNIV+DF  HKSL ++CGGVKQL QLSKSM+ T+RVNAVWALRNL FL DN CK GIF ELTA  L SLI DP+PSVQEQAL LVRNLVDG +DS+EY+  ED  +L+ +GRQL +ASK EVLIQGM+ L NV+SGNEFHKEAVMHQL+      T SI++K LQN+DS+LR AAVWALVNLT PSSPGA  RVV+LRNAG+  QLK MV DP LDVKLRVR ALGQ MTF
Sbjct:    1 MPASASAH-RPEDLISRLRSAAADGGANLKALRELKNQIIGNRTKKLSYIKLGAVPSVVSILASASADVKATDADADADALLLQSAAAIGSFACGFDAGVKAVIDAGAFPHLLGLISHPNDKVVDAGARSLKMIYQSKLAPKYDFLQDKNVTFLLSLLNSENENVTGLGASIITHSCETSIEQKALSDAGVLKRLICLIGGSLCQRDASLESLVTIIKGNPEVVSKFLGPESGRALTAVTELTKDRCPRTRLLACMCMIVIRNTCPCYLQDVGTKTKLVLILLELLDDPGQVGDEAAFALSSLIAEKEELQKLAFEENVVDKLCNHLRKGPLQAKRIQGILLALADLCSKLESCRSRLLSLQVLSMVTDALSHDSANVRAAACLCLKSVTRSVKDVIQNLSAGSFMKEVIVIPLVQLLHDTSTSVQVAALGAISNIVVDFTTHKSLFIQCGGVKQLAQLSKSMEPTLRVNAVWALRNLTFLTDNRCKGGIFLELTASALASLIGDPEPSVQEQALALVRNLVDGCIDSVEYVMSEDGHILHAIGRQLQTASKPEVLIQGMYALGNVASGNEFHKEAVMHQLLPQIGDTTQSIIIKHLQNNDSRLRTAAVWALVNLTFPSSPGAHGRVVKLRNAGITSQLKNMVNDPSLDVKLRVRAALGQIMTF 663
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QTT4 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 877.856 bits (2267), Expect = 0.000e+0
Identity = 449/656 (68.45%), Postives = 541/656 (82.47%), Query Frame = 0
 
Query:    6 IPSSWSSHNRPELLIARLR-SAGEG--RLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTSGDV-HSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            +P+S S+H RPE LI+RL  SA +G   LKALRELKNQIIGNRTKKL+YIKLGAVPS+V IL SA      +   ++L+QS A +GSFACG DAGVKAV++AGA  HL+ LISH NDKVVDA +RSL+MIYQSKLAPKYDFL  KN+ F+LSLLN  NENVTGLGASIITHSC + +EQ+ALSDAGVLK+L+ LL GSL QR ASLESLA++IK NPEV+SK++GPESG+AL+AVTELT DR PRTRLLACMC+IV++++SP  LQ  G K KL+ ILLEL+DDP +VGDEA FALSS I+E+E+LQKLAFEAN VD+LC+HL+   LQ +R QGILLALA LCSKLE CRS++ S +  N++ DAL+H+ + VR AACICLKS++RSV++LSAG F  E+I++PLV+LL DTSTS QVAA+GAISNIV+DF  HKSL ++CGGVKQLVQLSKSM+ST+RVNAVWALRNL FL+DN CK GIF ELTA  L SLI DP+PSVQ+QAL LVRNLVDG +DS++Y+  ED  +L+ +G QL +ASK EVLIQGM+VL NV+SGNEFHKEAVMHQ++        S+++K LQN+DS+LR AAVWALVNLT P SPG+  RV++LRNAG+  QLK MV DPCLDVKLRVR ALGQ MTF
Sbjct:    1 MPASASAH-RPEDLISRLSVSAADGGANLKALRELKNQIIGNRTKKLSYIKLGAVPSIVSILASASASADVEAADALLLQSAAAIGSFACGFDAGVKAVIDAGAVPHLLSLISHPNDKVVDAGSRSLKMIYQSKLAPKYDFLQEKNVTFLLSLLNTENENVTGLGASIITHSCETCIEQKALSDAGVLKRLICLLGGSLCQRYASLESLATIIKGNPEVVSKYLGPESGKALTAVTELTNDRCPRTRLLACMCMIVMRNTSPCYLQDVGTKTKLVLILLELLDDPSQVGDEAAFALSSLIAENEELQKLAFEANAVDKLCNHLRKGPLQAKRIQGILLALADLCSKLESCRSRLLSLQVLNMVTDALSHDSANVRAAACICLKSVTRSVKNLSAGSFMKEVIVIPLVQLLHDTSTSVQVAAIGAISNIVVDFTTHKSLFIQCGGVKQLVQLSKSMESTVRVNAVWALRNLTFLIDNRCKRGIFLELTASALTSLISDPEPSVQKQALALVRNLVDGCIDSVDYVMSEDGHILHAIGWQLQTASKPEVLIQGMYVLSNVASGNEFHKEAVMHQILLQ------SVIIKHLQNNDSRLRTAAVWALVNLTFPGSPGSHGRVIKLRNAGITSQLKNMVNDPCLDVKLRVRAALGQIMTF 649
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5BC95 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 866.3 bits (2237), Expect = 0.000e+0
Identity = 440/655 (67.18%), Postives = 523/655 (79.85%), Query Frame = 0
 
Query:    6 IPSSWSSHNRPELLIARLRSA---GEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTSGDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            +P+S S+H RPE L+ RLRSA    + +LKALRE+KNQIIGNRTKKL+YIKLGAVP+V  ++ +    T+ D  S+L+QS A +GSFACG +AGV+AVL AGAF HL+ L+S+ N KVVDA ARSLRMIYQSKLAPKYDFL  KN+EF+LSLLN  NENVTGLGASIITHSC +  EQ AL DAGVLKKL+ LL+GSLSQRDASLES+A++IK NPEV+SKFVGPE+GRALSAVTELTKDRYPRTRLLACMCLIVV+++SP  LQ   I+ KLI ILLEL+DDPG+VGDEA FALSS I+E EDLQKLAFE N +D+LC+HLQ   LQ +R+QGILLALA LCSKLE CRS+  + +  N +IDAL H+  EVR AACICL+S+SRS                  VKLL DTSTS QVAALGAISNIV+DF   KS+ ++CGGVKQLVQLSKSMD TIR+N+VW LRNLMFL DN CKEGIF ELTA  L SLICDP+PSVQ QALGLV NLVDG ++S+EY+F+ED ++L  VG+QL S  K EV IQGM+VL NV++GNEFHKEAVMHQL   A   T  I++KFLQ++DS+LR AAVW ++NLT P S GA+ R V+L +AG++ Q+K M  DPCLDVKLRVRT LGQ++TF
Sbjct:    1 MPTSASTH-RPEDLLTRLRSANADADAKLKALREVKNQIIGNRTKKLSYIKLGAVPAVXSVIAA----TADDCSSVLVQSAAAIGSFACGFEAGVQAVLRAGAFPHLLRLLSNSNGKVVDAGARSLRMIYQSKLAPKYDFLQEKNMEFLLSLLNSENENVTGLGASIITHSCETSAEQNALCDAGVLKKLIGLLQGSLSQRDASLESIATVIKSNPEVVSKFVGPENGRALSAVTELTKDRYPRTRLLACMCLIVVRNTSPGCLQDLAIRTKLILILLELLDDPGQVGDEASFALSSLIAEKEDLQKLAFEGNAIDKLCNHLQKGSLQAKRFQGILLALADLCSKLENCRSRFLALQVMNSVIDALTHDSGEVRAAACICLRSVSRS------------------VKLLSDTSTSVQVAALGAISNIVVDFTTRKSIFMQCGGVKQLVQLSKSMDPTIRLNSVWGLRNLMFLADNRCKEGIFLELTASLLASLICDPEPSVQVQALGLVCNLVDGCINSVEYVFVEDSIILQAVGKQLQSTLKAEVGIQGMYVLSNVATGNEFHKEAVMHQLFPQAGNSTQPIIIKFLQSNDSRLRTAAVWTVLNLTFPGSLGAYGRFVKLCSAGILSQIKNMANDPCLDVKLRVRTVLGQSLTF 632
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6FYS8 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 857.055 bits (2213), Expect = 0.000e+0
Identity = 428/644 (66.46%), Postives = 516/644 (80.12%), Query Frame = 0
 
Query:   14 NRPELLIARLRSAGEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTSGDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFSHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            N  +L    + S GE +LKALRELKN+IIGNRTKKL YIKLG VP+V +I+ S     +    S+L+QS AVLGSFACG D GV+AVL+AG F +L  L+SH ++KVVDA ARSLRMIYQSKLAPKYDFL  KN++F++SLLN  NENVTGLGASII HSC S  EQRAL  AGVLKKL+SLL GSLSQRDASLESLA++IK+N E +SKFV  ES RALS+V ELTKDRYPRTRLLAC+CLIV++++SP  LQ  GIK KL+ +LLEL DDPG+VGDEA FA SS I+E EDLQKLAFEAN +D+L +HLQ  +L  +R+QGILLALA LCSKLE CRSK  S KA NL+ +ALNH+ S+VR AACICL+S+SRS+++L AGHF  E+I+ PLV+LL D  TS QVAAL A+ NIVIDF  H+S  V+CGG+KQLVQL+KSMDST+R NA+ ALRNL+FL +  CKEGIF ELTA +L SL+ DP+P VQEQALGL+RNLVDG ++S+E++F ED ++L+ VGRQL +ASK E+  QGM+VL NV+ GNE HKEAVMHQL+   D    S ++KFLQ++D QLR AAVW +VNLT PSSPGAF R+VRL NAGVV Q+++M  DPCLDVKLRVRTALGQ  TF
Sbjct:   27 NHSDLHARLISSDGEVQLKALRELKNRIIGNRTKKLLYIKLGLVPAVADIVASKAETIADHESSLLVQSAAVLGSFACGFDVGVRAVLDAGVFPYLFRLLSHPDEKVVDAGARSLRMIYQSKLAPKYDFLQDKNMDFLVSLLNCENENVTGLGASIIIHSCKSVAEQRALCRAGVLKKLISLLDGSLSQRDASLESLAAIIKNNVEAVSKFVESESTRALSSVIELTKDRYPRTRLLACICLIVIRNTSPCYLQDIGIKTKLVYLLLELHDDPGQVGDEASFAFSSLIAEKEDLQKLAFEANAIDKLYNHLQKGVLHPKRFQGILLALADLCSKLENCRSKFLSLKALNLVTNALNHDSSDVRAAACICLRSVSRSIKNLCAGHFMNEMIVFPLVQLLDDPCTSVQVAALSALGNIVIDFTTHRSAFVQCGGMKQLVQLTKSMDSTVRSNALRALRNLVFLAEKVCKEGIFLELTASSLASLVSDPEPFVQEQALGLIRNLVDGCMNSVEFIFSEDRIILDAVGRQLRNASKAEIGKQGMYVLNNVARGNELHKEAVMHQLIPQTDNGMQSFMIKFLQSNDGQLRTAAVWTVVNLTFPSSPGAFDRLVRLSNAGVVSQIESMANDPCLDVKLRVRTALGQFRTF 670
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4LQR6 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746} (Fragment))

HSP 1 Score: 855.899 bits (2210), Expect = 0.000e+0
Identity = 445/678 (65.63%), Postives = 521/678 (76.84%), Query Frame = 0
 
Query:    1 MPSSAIPSSWSSHNRPELLIARLRSAGE---GRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTSGDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIFS------------------------------HKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLMTPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKL 645
            MP+S    S SS +RPE LI+RL SA     G+LKALRELKNQIIGNRTKKL+YIKLGAVPSVV IL+S   +      S+L+QS A +GSFACG+DAGVKAVL+AGAF HL+ LISH N+KVVDA ARSL+MIYQSKLAPKYDFL  KN+EF++SLLN  NENVTGLGASII+HSC + +EQ+ LSDAGVLK+L+SLL GSL +RDASLESLA++ K NPEV+S F+GPESGRALSAVTELTKDRYPRTRLLACMCLI ++++SP  LQ    K KL+ ILLEL+DDPG+VGDEA FALSS I+E EDLQ+LAFE NVVD+LC+HLQ   LQ +R QGILLALA LCSKLE CRS++ S                              +   NL+ DAL H+ ++VR AAC C               F  E+I++PLV+LL DTSTS QVAALGAISNIV++F+ HKS+ ++CGGVKQLVQLSKSM+S IR+NAVWALRNLMFL DN CKEGIF ELTA TL SLICDP+PSVQEQAL LVRNLVDG VDSIEY+FLED L+L+ +GRQ+ SA K EVL+QGM+VL NV+SGNE HKEAVMHQL       T  I++K LQN +SQLR AA WALVNLT PS+PGA +RV +L NAGV  QLK MV DPCLDVK+
Sbjct:    1 MPAS----SASSAHRPEDLISRLSSAAAEDGGKLKALRELKNQIIGNRTKKLSYIKLGAVPSVVSILSSTAAEDDASSASLLVQSAAAVGSFACGLDAGVKAVLDAGAFPHLLSLISHPNNKVVDAGARSLKMIYQSKLAPKYDFLEEKNMEFLISLLNNENENVTGLGASIISHSCETNVEQKELSDAGVLKRLISLLGGSLCERDASLESLATVFKGNPEVVSMFLGPESGRALSAVTELTKDRYPRTRLLACMCLITIRNASPCYLQDVEQKTKLMLILLELLDDPGQVGDEAAFALSSLIAEKEDLQQLAFEENVVDKLCNHLQKGPLQAKRIQGILLALADLCSKLESCRSRLLSLQVSTRASSLDLDLTRETSQVLGFNRLLMDNDVLNLVTDALTHDSADVRAAACSC--------------SFMNEVIVIPLVQLLHDTSTSVQVAALGAISNIVVEFSKHKSVFIQCGGVKQLVQLSKSMESAIRLNAVWALRNLMFLSDNRCKEGIFLELTASTLTSLICDPEPSVQEQALALVRNLVDGCVDSIEYVFLEDGLILHAIGRQVQSALKAEVLVQGMYVLSNVASGNEIHKEAVMHQLFPQDGSTTEPIMIKHLQNKNSQLRTAAAWALVNLTFPSNPGASSRVAKLWNAGVTSQLKNMVNDPCLDVKV 660
[Close]
BLAST of XM_017371261.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1NPF8 (Armadillo repeat-containing protein 8 {ECO:0000256|ARBA:ARBA00013746})

HSP 1 Score: 850.121 bits (2195), Expect = 0.000e+0
Identity = 437/664 (65.81%), Postives = 526/664 (79.22%), Query Frame = 0
 
Query:    1 MPSSAIPSSWSSHNRPELLIARLRSA-----GEGRLKALRELKNQIIGNRTKKLTYIKLGAVPSVVEILTSAVFDTSGDVHSILIQSCAVLGSFACGVDAGVKAVLEAGAFSHLMILISHRNDKVVDAAARSLRMIYQSKLAPKYDFLYAKNIEFILSLLNKGNENVTGLGASIITHSCWSKMEQRALSDAGVLKKLVSLLRGSLSQRDASLESLASLIKDNPEVISKFVGPESGRALSAVTELTKDRYPRTRLLACMCLIVVQSSSPASLQVAGIKMKLITILLELMDDPGEVGDEAGFALSSFISESEDLQKLAFEANVVDRLCDHLQNCLLQTRRYQGILLALAGLCSKLECCRSKIF-SHKAFNLIIDALNHERSEVRVAACICLKSLSRSVQHLSAGHFKTELIIMPLVKLLCDTSTSEQVAALGAISNIVIDFAMHKSLLVKCGGVKQLVQLSKSMDSTIRVNAVWALRNLMFLVDNTCKEGIFSELTAMTLRSLICDPKPSVQEQALGLVRNLVDGSVDSIEYMFLEDCLLLNTVGRQLLSASKTEVLIQGMFVLCNVSSGNEFHKEAVMHQLM-TPADPDTLSIVVKFLQNSDSQLRVAAVWALVNLTSPSSPGAFARVVRLRNAGVVQQLKTMVTDPCLDVKLRVRTALGQTMTF 657
            MP SA   S +SH R E LI RL SA      E +LK LRELKNQIIGNRTKK++YIK GAVP VV +L++   D   D   +++Q  A++GSFACGVD GV AVLEAGAF+HL+ L+S  N KVVDA AR+LRMIYQSK+APKYDF   KNI+F++SLL++ NENVTGLGASIITHSC +  EQ+ L+DAGVLKKL++LL G+ +QRDASLES A++IK+NPEVISKFVGPE+GR    + ELTKDRYPRTRLLAC C+ ++++++P+ LQ  G++ KLI +LLEL+DDPG+VGDEA F LSSFI + E LQKLAFE N +D+L +  Q  LLQ +R QG+ + LA +CS LECCRS +  S KA N + DAL H   +VRVAACICLK++SRSV++LSAG F TE +IMPL++LL DTSTS QVAAL  ISNIV+DF MHKSL V+ GGVKQLVQLSKSMDS IR+NAVWALRNL+FLVD+ CKE IF EL A+TL SL+ DP  SVQEQAL L+ NLV+G VDSIEY+F ED LL+N VGRQL SASK EVLIQGM+VLCNV+SG EFHKEAVMHQL+  P +  T SI+V  LQ+  +QLR AAVW +VNLT P+  GA ARVV+LRNAG+V QLK MV DPCLDVKLRV+TALGQ+MTF
Sbjct:    1 MPGSA---STTSH-RSESLITRLHSASSSQNNETKLKVLRELKNQIIGNRTKKISYIKQGAVPFVVSVLSNC--DCVNDCL-VVVQCAAIVGSFACGVDVGVTAVLEAGAFAHLIALLSRDNVKVVDAGARALRMIYQSKVAPKYDFFEEKNIQFLISLLDRNNENVTGLGASIITHSCQTHDEQKILADAGVLKKLINLLGGTTNQRDASLESFATIIKENPEVISKFVGPENGRTWCTLIELTKDRYPRTRLLACKCINLIKNAAPSYLQYVGMRTKLILVLLELLDDPGQVGDEALFTLSSFIEDDEGLQKLAFETNTIDKLLNRTQKELLQAKRLQGVFITLANICSNLECCRSILIQSPKALNFVTDALTHTNVDVRVAACICLKNISRSVKYLSAGRFMTESVIMPLIQLLFDTSTSVQVAALCTISNIVVDFTMHKSLFVQNGGVKQLVQLSKSMDSVIRLNAVWALRNLVFLVDSRCKEVIFMELRALTLTSLVSDPSASVQEQALALICNLVNGPVDSIEYVFSEDGLLMNAVGRQLWSASKPEVLIQGMYVLCNVASGKEFHKEAVMHQLLPQPNNDGTQSIMVTMLQSDTAQLRTAAVWTIVNLTIPTGAGALARVVKLRNAGIVSQLKNMVNDPCLDVKLRVKTALGQSMTF 657
Match NameStatsDescription
A0A5J5AEE8E-Value: 0.000e+0, PID: 71.71Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A0A5B6ZSE1E-Value: 0.000e+0, PID: 72.87Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A0A118K5N2E-Value: 0.000e+0, PID: 69.09Armadillo repeat-containing protein 8 {ECO:0000256... [more]
D7SL42E-Value: 0.000e+0, PID: 68.55Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A0A2R6PQT4E-Value: 0.000e+0, PID: 69.58Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A0A2R6QTT4E-Value: 0.000e+0, PID: 68.45Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A5BC95E-Value: 0.000e+0, PID: 67.18Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A0A6P6FYS8E-Value: 0.000e+0, PID: 66.46Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A0A6A4LQR6E-Value: 0.000e+0, PID: 65.63Armadillo repeat-containing protein 8 {ECO:0000256... [more]
A0A2U1NPF8E-Value: 0.000e+0, PID: 65.81Armadillo repeat-containing protein 8 {ECO:0000256... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.