MK001018 GSSR-019

Resource Type: 
Genetic Marker
Name: 
MK001018 GSSR-019
Identifier: 
MK001018_GSSR_019
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Budahn H, Barański R, Grzebelus D, Kiełkowska A, Straka P, Metge K, Linke B, Nothnagel T. Mapping genes governing flower architecture and pollen development in a double mutant population of carrot.. Frontiers in plant science. 2014; 5:504.
  2. Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
  3. Alessandro MS, Galmarini CR, Iorizzo M, Simon PW. Molecular mapping of vernalization requirement and fertility restoration genes in carrot.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2013 Feb; 126(2):415-23.
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 7 relationships.
Relationships
The genetic_marker, MK001018 GSSR-019, is adjacent to primer, GSSR-19-F.
The genetic_marker, MK001018 GSSR-019, is adjacent to primer, GSSR-19-R.
The genetic_marker, MK001018 GSSR-019, is adjacent to primer, GSSR-19-F.
The genetic_marker, MK001018 GSSR-019, is adjacent to primer, GSSR-19-R.
The genetic_marker, MK001018 GSSR-019, is adjacent to gene, DCAR_018444.
The genetic_marker, MK001018 GSSR-019, is located in gene, LOC108220506.
The marker_locus, GSSR-019, is an instance of genetic_marker, MK001018 GSSR-019.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2013 Criolla×Bienal580.6GSSR-019MapViewer
2011 B493×QAL B493LG05142.8GSSR-019MapViewer
2014 yel×colaLG548.6GSSR-019MapViewer
2011 B493×QAL QALLG05150GSSR-019MapViewer
Synonyms: 
  • MK001018
Sequence Coordinates: 
DCARv2_Chr5:30113888..30114094-
View location in JBrowse: 
DCARv2_Chr5:30113888..30114094-
Sequence: 
CGTTCGTGATCTTGATCATCGCTGAACGAGAGTCTTCGTCCTACATAATT
ACTTCCTAGTCTTCTCTTCCTCTTCCGAGTTGGATTCGGAGAGAATACTA
CTGAATCCATTGAGACAAAGACTATGTGTGTGGAGGGAGAGACAGACAGA
CAGACAGAGAGAGAGAGTCGATTGCAACTTACTATGCAATATACAGAGAC
ACAACCAATTAGCACAAAGCGAGCGAAAGAGCGAGAACGAGAGCGAGAGA
GAGAGGGGGCGAGAAAGAGAGACTCTGCAAGTGCAACTCGCAATCCTCAA
TTTACAGACACAAGCAAACCACATACAAATCATACACAGACTGGAGGGCG
AGTATACCTTACAATGGCTTGCAAGAACCAAAACGAAGCGCCTCGATGAA
GCACCGGTTGGTGTCTTACGAGCACGGGT
Sequences: 
>MK001018_GSSR_019 ID=MK001018_GSSR_019; Name=MK001018 GSSR-019; organism=Daucus carota; type=genetic_marker
CGTTCGTGATCTTGATCATCGCTGAACGAGAGTCTTCGTCCTACATAATT
ACTTCCTAGTCTTCTCTTCCTCTTCCGAGTTGGATTCGGAGAGAATACTA
CTGAATCCATTGAGACAAAGACTATGTGTGTGGAGGGAGAGACAGACAGA
CAGACAGAGAGAGAGAGTCGATTGCAACTTACTATGCAATATACAGAGAC
ACAACCAATTAGCACAAAGCGAGCGAAAGAGCGAGAACGAGAGCGAGAGA
GAGAGGGGGCGAGAAAGAGAGACTCTGCAAGTGCAACTCGCAATCCTCAA
TTTACAGACACAAGCAAACCACATACAAATCATACACAGACTGGAGGGCG
AGTATACCTTACAATGGCTTGCAAGAACCAAAACGAAGCGCCTCGATGAA
GCACCGGTTGGTGTCTTACGAGCACGGGT
This is the primary representative sequence for this feature.
Sequence Length: 
429