Resource Type:
Genetic Marker
Name:
MK001064 GSSR-065
Identifier:
MK001064_GSSR_065
Organism:
Marker Type:
SSR
Publication:
- Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
Cross Reference:
NCBI Nuccore | ![]() |
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Relationship:
Relationships |
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The genetic_marker, MK001064 GSSR-065, is adjacent to primer, GSSR-65-F. |
The genetic_marker, MK001064 GSSR-065, is adjacent to primer, GSSR-65-R. |
The genetic_marker, MK001064 GSSR-065, is located in gene, DCAR_006329. |
The genetic_marker, MK001064 GSSR-065, is located in gene, LOC108210186. |
The marker_locus, GSSR-065, is an instance of genetic_marker, MK001064 GSSR-065. |

MapViewer Marker Map Positions:
Map Name | Linkage Group | Position | Locus | MapViewer |
---|---|---|---|---|
2011 SS1061 | 1061-2 | 13.276 | GSSR-065 | MapViewer |
2016 Integ NG bin map | CH2 | 54.844 | GSSR-065 | MapViewer |
2016 70349 NG bin map | Chr2 | 53.076 | GSSR-065 | MapViewer |
2016 Integ NG full map | CH2 | 18.102 | GSSR-065 | MapViewer |
2011 B493×QAL QAL | LG02 | 66.7 | GSSR-065 | MapViewer |
2011 SS1061QTL | 1061QTL-7 | 16.25 | GSSR-065 | MapViewer |
2016 70349 NG full map | Chr2 | 53.076 | GSSR-065 | MapViewer |
2011 B493×QAL B493 | LG02 | 85 | GSSR-065 | MapViewer |
Synonyms:
- MK001064
Sequence Coordinates:
DCARv2_Chr2:24327454..24327849+
View location in JBrowse:
Sequence:
ACCATAACCTAGCACTAAAACACTGGATTACAGGCTTTAGGCACTGCAAA
ACAGAAACCCAGAAGCTTCAATGCCACAATTATGTCACATGATATTTAAA
TCTTGTGTGTGTGTGTGTGTATTAACTACGAAGAAATCATATCCATTTCT
CACTGTTATCAATATATCATGATTAAAGCAGTTCAATGGTATAGTAGGAG
TGATTCAATGGTAGGAGTTTAATGTTTGAGTTAATTTCTTCATGCAGATG
ATTGCAGCTTAAAGCAGGAGTAACTGACAAAAACCAACCGACCAAAAGAT
CTACCGTTCGACCTGATTCAATGGTATAGTATGCATAGAGGGGCTAAAGT
GTAAAAACTACAGAATAATTGGGCTTTCACAAAATCAAAACTAACATCAT
CTTACTACATCAATCGCCATGACCTACAGAGTCACAGTTCTCCAACCACA
GTCCTGACTGTCAGTTTGTCAGAAAAGCCTCACAAGAATTACGCCCAATA
TATATCCATATTTTCAACCTAGGAATTAGCTCCAAAGTATTACATCAAGA
CATACTCACAAAACTCAACTTTTGCCTCAATTCCAGCTGAAAA
Sequences:
>MK001064_GSSR_065 ID=MK001064_GSSR_065; Name=MK001064 GSSR-065; organism=Daucus carota; type=genetic_marker
ACCATAACCTAGCACTAAAACACTGGATTACAGGCTTTAGGCACTGCAAA
ACAGAAACCCAGAAGCTTCAATGCCACAATTATGTCACATGATATTTAAA
TCTTGTGTGTGTGTGTGTGTATTAACTACGAAGAAATCATATCCATTTCT
CACTGTTATCAATATATCATGATTAAAGCAGTTCAATGGTATAGTAGGAG
TGATTCAATGGTAGGAGTTTAATGTTTGAGTTAATTTCTTCATGCAGATG
ATTGCAGCTTAAAGCAGGAGTAACTGACAAAAACCAACCGACCAAAAGAT
CTACCGTTCGACCTGATTCAATGGTATAGTATGCATAGAGGGGCTAAAGT
GTAAAAACTACAGAATAATTGGGCTTTCACAAAATCAAAACTAACATCAT
CTTACTACATCAATCGCCATGACCTACAGAGTCACAGTTCTCCAACCACA
GTCCTGACTGTCAGTTTGTCAGAAAAGCCTCACAAGAATTACGCCCAATA
TATATCCATATTTTCAACCTAGGAATTAGCTCCAAAGTATTACATCAAGA
CATACTCACAAAACTCAACTTTTGCCTCAATTCCAGCTGAAAA
This is the primary representative sequence for this feature.
Sequence Length:
593