Resource Type:
Genetic Marker
Name:
MK001111 GSSR-112
Identifier:
MK001111_GSSR_112
Organism:
Marker Type:
SSR
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
Cross Reference:
NCBI Nuccore | ![]() |
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Relationship:
Relationships |
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The genetic_marker, MK001111 GSSR-112, is adjacent to primer, GSSR-112-F. |
The genetic_marker, MK001111 GSSR-112, is adjacent to primer, GSSR-112-R. |
The marker_locus, GSSR-112, is an instance of genetic_marker, MK001111 GSSR-112. |

MapViewer Marker Map Positions:
Map Name | Linkage Group | Position | Locus | MapViewer |
---|---|---|---|---|
2011 B493×QAL QAL | LG05 | 4.8 | GSSR-112 | MapViewer |
2011 B493×QAL B493 | LG05 | 4.8 | GSSR-112 | MapViewer |
2016 70349 NG bin map | Chr5 | 70.457 | GSSR-112 | MapViewer |
2016 Integ NG bin map | CH5 | 0 | GSSR-112 | MapViewer |
2016 Integ NG full map | CH5 | 0.25 | GSSR-112 | MapViewer |
2016 70349 NG full map | Chr5 | 70.457 | GSSR-112 | MapViewer |
Synonyms:
- MK001111
Sequence:
ACCTCTCTTGTYYAAGAAMACCACACGCACCGTCGCTCTCTCTCTCTCTC
TCTCTCTCTCACACACACACAAACACACACACACATACAAAAACACATAC
AAATTCATGTGCCGTCTCTCTCTTTTAAATTCCAGCATCTGAACCTCTTA
ATAACTCACCTGGTGATACTGTCCTGACATGTCGAGCATACTTGGTGTGG
ACTGTGT
Sequences:
>MK001111_GSSR_112 ID=MK001111_GSSR_112; Name=MK001111 GSSR-112; organism=Daucus carota; type=genetic_marker
ACCTCTCTTGTYYAAGAAMACCACACGCACCGTCGCTCTCTCTCTCTCTC
TCTCTCTCTCACACACACACAAACACACACACACATACAAAAACACATAC
AAATTCATGTGCCGTCTCTCTCTTTTAAATTCCAGCATCTGAACCTCTTA
ATAACTCACCTGGTGATACTGTCCTGACATGTCGAGCATACTTGGTGTGG
ACTGTGT
This is the primary representative sequence for this feature.
Sequence Length:
207