MK001111 GSSR-112

Resource Type: 
Genetic Marker
Name: 
MK001111 GSSR-112
Identifier: 
MK001111_GSSR_112
Marker Type: 
SSR
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
Cross Reference: 
NCBI NuccoreLoading content
Relationship: 
There are 3 relationships.
Relationships
The genetic_marker, MK001111 GSSR-112, is adjacent to primer, GSSR-112-F.
The genetic_marker, MK001111 GSSR-112, is adjacent to primer, GSSR-112-R.
The marker_locus, GSSR-112, is an instance of genetic_marker, MK001111 GSSR-112.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2011 B493×QAL QALLG054.8GSSR-112MapViewer
2011 B493×QAL B493LG054.8GSSR-112MapViewer
2016 70349 NG bin mapChr570.457GSSR-112MapViewer
2016 Integ NG bin mapCH50GSSR-112MapViewer
2016 Integ NG full mapCH50.25GSSR-112MapViewer
2016 70349 NG full mapChr570.457GSSR-112MapViewer
Synonyms: 
  • MK001111
Sequence: 
ACCTCTCTTGTYYAAGAAMACCACACGCACCGTCGCTCTCTCTCTCTCTC
TCTCTCTCTCACACACACACAAACACACACACACATACAAAAACACATAC
AAATTCATGTGCCGTCTCTCTCTTTTAAATTCCAGCATCTGAACCTCTTA
ATAACTCACCTGGTGATACTGTCCTGACATGTCGAGCATACTTGGTGTGG
ACTGTGT
Sequences: 
>MK001111_GSSR_112 ID=MK001111_GSSR_112; Name=MK001111 GSSR-112; organism=Daucus carota; type=genetic_marker
ACCTCTCTTGTYYAAGAAMACCACACGCACCGTCGCTCTCTCTCTCTCTC
TCTCTCTCTCACACACACACAAACACACACACACATACAAAAACACATAC
AAATTCATGTGCCGTCTCTCTCTTTTAAATTCCAGCATCTGAACCTCTTA
ATAACTCACCTGGTGATACTGTCCTGACATGTCGAGCATACTTGGTGTGG
ACTGTGT
This is the primary representative sequence for this feature.
Sequence Length: 
207