Resource Type:
Genetic Marker
Name:
MK001153 GSSR-154
Identifier:
MK001153_GSSR_154
Organism:
Marker Type:
SSR
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
Cross Reference:
NCBI Nuccore | ![]() |
---|
Relationship:
Relationships |
---|
The genetic_marker, MK001153 GSSR-154, is adjacent to primer, GSSR-154-F. |
The genetic_marker, MK001153 GSSR-154, is adjacent to primer, GSSR-154-R. |
The genetic_marker, MK001153 GSSR-154, is located in gene, LOC108210059. |
The marker_locus, GSSR-154, is an instance of genetic_marker, MK001153 GSSR-154. |

MapViewer Marker Map Positions:
Synonyms:
- MK001153
Sequence Coordinates:
DCARv2_Chr2:29002542..29003633-
View location in JBrowse:
Sequence:
TCAAACCCCTCTCACTCAAACGAAAAGCAATACAATAATACATTTTCTCA
GATCTTTAAGATTCATCTTAAGCCCTTTTTATTATCTCAATTTATCATCT
TCATCATCAATCTCTCTGTGGGTGCGCTTATATGTGATGGCGTCGAAATG
CTGCAGTAGATTGTTGACAAGAAGTTCAACATCGTTCCTTAAATCCGCCT
TTAAATCAACATCATCAGCATCCGCAGCAGCTTCCTCAGCCAAATCTTGC
AAATCCACTCCTCTCCGCCGTTTCTCTCTCTCCAGGTCTCTCTCTCTCTC
TCTCTCTCCCCCCCTCCCCCTCGCCCTCTCTCTCTCCGCTCTACTTACAT
GTTTGTGGATGCATATGGTTGAATTTTGAATTGGCTGCAATAAATTGATG
AAAATGTTGTTAAATTAATAATAGAATTCCATCGGAGTTAGGAGCGGTGC
AGTCAATGATGCCACTGCATAGTGCGGTCGCTGCAGCTAGGATGACGTCT
TGCCTCAGT
Sequences:
>MK001153_GSSR_154 ID=MK001153_GSSR_154; Name=MK001153 GSSR-154; organism=Daucus carota; type=genetic_marker
TCAAACCCCTCTCACTCAAACGAAAAGCAATACAATAATACATTTTCTCA
GATCTTTAAGATTCATCTTAAGCCCTTTTTATTATCTCAATTTATCATCT
TCATCATCAATCTCTCTGTGGGTGCGCTTATATGTGATGGCGTCGAAATG
CTGCAGTAGATTGTTGACAAGAAGTTCAACATCGTTCCTTAAATCCGCCT
TTAAATCAACATCATCAGCATCCGCAGCAGCTTCCTCAGCCAAATCTTGC
AAATCCACTCCTCTCCGCCGTTTCTCTCTCTCCAGGTCTCTCTCTCTCTC
TCTCTCTCCCCCCCTCCCCCTCGCCCTCTCTCTCTCCGCTCTACTTACAT
GTTTGTGGATGCATATGGTTGAATTTTGAATTGGCTGCAATAAATTGATG
AAAATGTTGTTAAATTAATAATAGAATTCCATCGGAGTTAGGAGCGGTGC
AGTCAATGATGCCACTGCATAGTGCGGTCGCTGCAGCTAGGATGACGTCT
TGCCTCAGT
This is the primary representative sequence for this feature.
Sequence Length:
509