MK001179 BSSR-022

Resource Type: 
Genetic Marker
Name: 
MK001179 BSSR-022
Identifier: 
MK001179_BSSR_022
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Yildiz M, Willis DK, Cavagnaro PF, Iorizzo M, Abak K, Simon PW. Expression and mapping of anthocyanin biosynthesis genes in carrot. Theoretical and Applied Genetics. 2013; 126(7):1689-1702.
  2. Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW. Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.. BMC genomics. 2011 Aug 01; 12:386.
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 3 relationships.
Relationships
The genetic_marker, MK001179 BSSR-022, is adjacent to primer, BSSR-22-F.
The genetic_marker, MK001179 BSSR-022, is adjacent to primer, BSSR-22-R.
The marker_locus, BSSR-022, is an instance of genetic_marker, MK001179 BSSR-022.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2011 B493×QAL QALLG0264.7BSSR-022MapViewer
2011 B493×QAL B493LG0283.9BSSR-022MapViewer
2013 10117 BLG02118.2BSSR-022MapViewer
2013 10117 ALG0262.4BSSR-022MapViewer
Synonyms: 
  • MK001179
Sequence: 
CTTGAGACACGATTTGTCTCCTTGTTTCAAGAACTTTATCTTGGTATTCG
GGGGTGTTAAAGCACCCCTGGCAAGAACAAGTTTCAGAACAGTAGTATCC
AGAAGCAAAGCAATTACAGTATCTACAAGGAGCAATTTGTTTGGATGTGA
AATTAAAGCACGTCTGTTTAAGGTATAAAAATTGATAATAAACCCAAACC
ACTTACTGTTTCAGACATTTTGTTTTCTTGCAGTTGCAGCGTTTGCATCC
ATCTCCATCACTGGAGCCTGTTGACCTTTTCCTAAAAAAATTGAATAATT
GATGGTAAACATGTTAAAGCAAGAAGCATTCGCATATATATATAGGGTTG
CGCTATATGAAGAACACATTTTAGTGTGAGAACATCGAAAACATATTGTT
CTGCTGCAGACACTACAAGAAATTCGCATTCACACAACAGTTATGAGACA
ACGGTTGAAAATATACAATATTAAAAAATAAAATAACTGCAAATCAATTG
TTTTGCACTTTTTGAAAAGCGCAGAACATTTTGGAAAATTTTCACTTTTT
AAATGTTGTATTATTTAACAGCAGAACAACGGTGTTCTCAGTATCCTCAT
AATAAAAACTGTTTTCCAATGAGAATACCCTATACATACATACATACATA
CATACATACATACATACATACATACATACATACATACATACATACATGAG
TGTGTGTGTGTGTTAATTAACCATGAAAGAATATCATGAATCTTGCCTTT
TCTTT
Sequences: 
>MK001179_BSSR_022 ID=MK001179_BSSR_022; Name=MK001179 BSSR-022; organism=Daucus carota; type=genetic_marker
CTTGAGACACGATTTGTCTCCTTGTTTCAAGAACTTTATCTTGGTATTCG
GGGGTGTTAAAGCACCCCTGGCAAGAACAAGTTTCAGAACAGTAGTATCC
AGAAGCAAAGCAATTACAGTATCTACAAGGAGCAATTTGTTTGGATGTGA
AATTAAAGCACGTCTGTTTAAGGTATAAAAATTGATAATAAACCCAAACC
ACTTACTGTTTCAGACATTTTGTTTTCTTGCAGTTGCAGCGTTTGCATCC
ATCTCCATCACTGGAGCCTGTTGACCTTTTCCTAAAAAAATTGAATAATT
GATGGTAAACATGTTAAAGCAAGAAGCATTCGCATATATATATAGGGTTG
CGCTATATGAAGAACACATTTTAGTGTGAGAACATCGAAAACATATTGTT
CTGCTGCAGACACTACAAGAAATTCGCATTCACACAACAGTTATGAGACA
ACGGTTGAAAATATACAATATTAAAAAATAAAATAACTGCAAATCAATTG
TTTTGCACTTTTTGAAAAGCGCAGAACATTTTGGAAAATTTTCACTTTTT
AAATGTTGTATTATTTAACAGCAGAACAACGGTGTTCTCAGTATCCTCAT
AATAAAAACTGTTTTCCAATGAGAATACCCTATACATACATACATACATA
CATACATACATACATACATACATACATACATACATACATACATACATGAG
TGTGTGTGTGTGTTAATTAACCATGAAAGAATATCATGAATCTTGCCTTT
TCTTT
This is the primary representative sequence for this feature.
Sequence Length: 
755