MK001570 FLS1

Resource Type: 
Genetic Marker
Name: 
MK001570 FLS1
Identifier: 
MK001570_FLS1
Organism: 
Daucus carota subspecies sativus
Marker Type: 
STS
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Yildiz M, Willis DK, Cavagnaro PF, Iorizzo M, Abak K, Simon PW. Expression and mapping of anthocyanin biosynthesis genes in carrot. Theoretical and Applied Genetics. 2013; 126(7):1689-1702.
Cross Reference: 
NCBI Nuccore
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK001570 FLS1, is adjacent to primer, Flavone synthase F.
The genetic_marker, MK001570 FLS1, is adjacent to primer, Flavone synthase R.
The genetic_marker, MK001570 FLS1, is adjacent to gene, DCAR_009489.
The genetic_marker, MK001570 FLS1, is located in gene, LOC108213383.
The marker_locus, FLS1, is an instance of genetic_marker, MK001570 FLS1.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH320.566FLS1MapViewer
2016 Integ NG full mapCH319.803FLS1MapViewer
2016 70349 NG full mapChr365.217FLS1MapViewer
2016 70349 NG bin mapChr365.217FLS1MapViewer
2013 10117 ALG0335.1FLS1MapViewer
2013 10117 BLG0373.4FLS1MapViewer
Synonyms: 
  • MK001570
Sequence Coordinates: 
DCARv2_Chr3:8014017..8014951+
View location in JBrowse: 
DCARv2_Chr3:8014017..8014951+
Sequence: 
GGACTTAAAATGGCTCCAACAACTATTACTGCATTGGCCAAGGAAAAAAC
ACTTAACTCTGATTTTGTCCGGGATGAGGATGAGCGTCCCAAAGTTGCCT
ACAATCAATTCAGCACTGAAATTCCCATTATTTCTTTAGCTGGTATCGAT
GATGATTCCAATGGCAGGAGACCTGAGGTGTGTCGTAAAATAGTGGAGGC
CTTCGAAGACTGGGGGATTTTCCAGGTAGTTGATCACGGTATTGACAGCG
GTTTGATCGCGGAAATGTCTCGTCTGTCTCGTGAATTCTTTGCTTTGCCT
GCCGAGGAGAAACTTCGGTATGATACTACTGGTGGAAAGAGAGGCGGCTT
CACTATCTCCACTCATCTTCAGGGTGACGATGTGAAGGATTGGCGTGAGT
TTGTTGTTTATTTTTCGTACCCAGTCGATGCTCGGGACTACTCGAGATGC
CCTGATAAGCCCGAGGGATGGAGGTCAGTTACAGAGGTTTATAGTGAGAA
GTTGATGGCGCTAGGTGCCAAGTTACTGGAAGTGCTATCAGAGGCCATGG
GGCTTGAAAAAGAGGCTCTTACAGAGGCTTGTGTGAATATGGAACAGAAA
GTGTTGATCAATTACTATCCTACATGTCCCCAACCGGACTTGACACTTGG
AGTCAGAAGGCACACGGATCCGGGTACGATTACCATTTTGCTTCAGGACA
TGGTTGGGGGGTTACAGGCTACCAGGGATGGCGGCAAAACTTGGATTACT
GTTCAGCCTGTCGAGGGAGCTTTTGTCGTCAATTTGGGTGATCATGGTCA
TTATTTGAGCAATGGAAGGTTCAAGAATGCCGATCACCAAGCAGTAGTGA
ATTCAACCTCTAGCAGATTGTCCATCGCAACTTTCCAGAACCCAGCTCAG
AATGCTATAGTGTATCCTTTAAAGATCAGGGAGGGCGAGAAGCCAATTCT
TGAGGAGGCCATGACATACGCCGAGATGTATAAGAAAAACATGACTAAAC
ATATTGAGGTGGCTACTCAGAAGAAATTGGCCAAGGAGAAAAGATTGCAG
AACGAGAAGGCCAAGCTGGAGACGAAATTTTAGCTTAGGCTTTGTCCATT
ATAGTATCTATATTATGTTTTCCGAGTTTGTGTTATCTACAATAATACAG
TAGTKAATWAGGCCATTTTTGTTAATGTCTAAATKCTGCGTACTGTGGTC
AGAGTWCTGTKTTAAGAAATTCATACAATATCGTTCTTAATCCTAAACTT
TCGTGTGTTTGATTTTGTTCATTCTATACAATAATTTAATAGTTCATTCT
ATTACAGTTATGCGAAAWAAAAAAAAAA
Sequences: 
>MK001570_FLS1 ID=MK001570_FLS1; Name=MK001570 FLS1; organism=Daucus carota; type=genetic_marker
GGACTTAAAATGGCTCCAACAACTATTACTGCATTGGCCAAGGAAAAAAC
ACTTAACTCTGATTTTGTCCGGGATGAGGATGAGCGTCCCAAAGTTGCCT
ACAATCAATTCAGCACTGAAATTCCCATTATTTCTTTAGCTGGTATCGAT
GATGATTCCAATGGCAGGAGACCTGAGGTGTGTCGTAAAATAGTGGAGGC
CTTCGAAGACTGGGGGATTTTCCAGGTAGTTGATCACGGTATTGACAGCG
GTTTGATCGCGGAAATGTCTCGTCTGTCTCGTGAATTCTTTGCTTTGCCT
GCCGAGGAGAAACTTCGGTATGATACTACTGGTGGAAAGAGAGGCGGCTT
CACTATCTCCACTCATCTTCAGGGTGACGATGTGAAGGATTGGCGTGAGT
TTGTTGTTTATTTTTCGTACCCAGTCGATGCTCGGGACTACTCGAGATGC
CCTGATAAGCCCGAGGGATGGAGGTCAGTTACAGAGGTTTATAGTGAGAA
GTTGATGGCGCTAGGTGCCAAGTTACTGGAAGTGCTATCAGAGGCCATGG
GGCTTGAAAAAGAGGCTCTTACAGAGGCTTGTGTGAATATGGAACAGAAA
GTGTTGATCAATTACTATCCTACATGTCCCCAACCGGACTTGACACTTGG
AGTCAGAAGGCACACGGATCCGGGTACGATTACCATTTTGCTTCAGGACA
TGGTTGGGGGGTTACAGGCTACCAGGGATGGCGGCAAAACTTGGATTACT
GTTCAGCCTGTCGAGGGAGCTTTTGTCGTCAATTTGGGTGATCATGGTCA
TTATTTGAGCAATGGAAGGTTCAAGAATGCCGATCACCAAGCAGTAGTGA
ATTCAACCTCTAGCAGATTGTCCATCGCAACTTTCCAGAACCCAGCTCAG
AATGCTATAGTGTATCCTTTAAAGATCAGGGAGGGCGAGAAGCCAATTCT
TGAGGAGGCCATGACATACGCCGAGATGTATAAGAAAAACATGACTAAAC
ATATTGAGGTGGCTACTCAGAAGAAATTGGCCAAGGAGAAAAGATTGCAG
AACGAGAAGGCCAAGCTGGAGACGAAATTTTAGCTTAGGCTTTGTCCATT
ATAGTATCTATATTATGTTTTCCGAGTTTGTGTTATCTACAATAATACAG
TAGTKAATWAGGCCATTTTTGTTAATGTCTAAATKCTGCGTACTGTGGTC
AGAGTWCTGTKTTAAGAAATTCATACAATATCGTTCTTAATCCTAAACTT
TCGTGTGTTTGATTTTGTTCATTCTATACAATAATTTAATAGTTCATTCT
ATTACAGTTATGCGAAAWAAAAAAAAAA
This is the primary representative sequence for this feature.
Sequence Length: 
1328