MK002162 ESSR-057

Resource Type: 
Genetic Marker
Name: 
MK002162 ESSR-057
Identifier: 
MK002162_ESSR_057
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
  2. Yildiz M, Willis DK, Cavagnaro PF, Iorizzo M, Abak K, Simon PW. Expression and mapping of anthocyanin biosynthesis genes in carrot. Theoretical and Applied Genetics. 2013; 126(7):1689-1702.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK002162 ESSR-057, is adjacent to primer, ESSR-057-F.
The genetic_marker, MK002162 ESSR-057, is adjacent to primer, ESSR-057-R.
The genetic_marker, MK002162 ESSR-057, is located in gene, DCAR_011197.
The genetic_marker, MK002162 ESSR-057, is located in gene, LOC108213219.
The marker_locus, ESSR-057, is an instance of genetic_marker, MK002162 ESSR-057.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2013 10117 BLG03110.1ESSR-057MapViewer
2011 SS10611061-315.243ESSR-057MapViewer
2013 10117 ALG0370.8ESSR-057MapViewer
2011 SS1061QTL1061QTL-122.03ESSR-057MapViewer
Synonyms: 
  • MK002162
Sequence Coordinates: 
DCARv2_Chr3:33529830..33530042+
View location in JBrowse: 
DCARv2_Chr3:33529830..33530042+
Sequence: 
AATTGGAGGAGAAGGTGGCTTCACAGATGGAGGTGGTGGTGGTGGCACCT
TGACTGGGACAGGTGGTTGTGGTGGTGGTGGGGCCTTGGATTGTACCGGA
GGAGGTGGAATCTTGACTGGAGTAGGAGCTACAGGTGGTGGTGCCTTCAC
TGGGGCAGCTACTGGAGTAGGAGCAGGAGCAGGAGCAATAGGTGACTTGA
GGGGACTCTGTGC
Sequences: 
>MK002162_ESSR_057 ID=MK002162_ESSR_057; Name=MK002162 ESSR-057; organism=Daucus carota; type=genetic_marker
AATTGGAGGAGAAGGTGGCTTCACAGATGGAGGTGGTGGTGGTGGCACCT
TGACTGGGACAGGTGGTTGTGGTGGTGGTGGGGCCTTGGATTGTACCGGA
GGAGGTGGAATCTTGACTGGAGTAGGAGCTACAGGTGGTGGTGCCTTCAC
TGGGGCAGCTACTGGAGTAGGAGCAGGAGCAGGAGCAATAGGTGACTTGA
GGGGACTCTGTGC
This is the primary representative sequence for this feature.
Sequence Length: 
213
Repeat Motif: 
(GGT)4