MK002208 ESSR-103

Resource Type: 
Genetic Marker
Name: 
MK002208 ESSR-103
Identifier: 
MK002208_ESSR_103
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  2. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
  3. Yildiz M, Willis DK, Cavagnaro PF, Iorizzo M, Abak K, Simon PW. Expression and mapping of anthocyanin biosynthesis genes in carrot. Theoretical and Applied Genetics. 2013; 126(7):1689-1702.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK002208 ESSR-103, is adjacent to primer, ESSR-103-F.
The genetic_marker, MK002208 ESSR-103, is adjacent to primer, ESSR-103-R.
The genetic_marker, MK002208 ESSR-103, is adjacent to gene, DCAR_024514.
The genetic_marker, MK002208 ESSR-103, is located in gene, LOC108196100.
The marker_locus, ESSR-103, is an instance of genetic_marker, MK002208 ESSR-103.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2015 SFF×HM2Chr712.463ESSR-103MapViewer
2014 J.Parsons Th. Fig_3.5Chr726.729ESSR-103MapViewer
2014 J.Parsons Th. SFF×HM2Chr712.463ESSR-103MapViewer
2013 10117 ALG0743.7ESSR-103MapViewer
2015 MB MergedChr726.729ESSR-103MapViewer
2013 10117 BLG0728.4ESSR-103MapViewer
2014 J.Parsons Th. Fig_2.4Chr726.729ESSR-103MapViewer
Synonyms: 
  • MK002208
Sequence Coordinates: 
DCARv2_Chr7:15338138..15338353+
View location in JBrowse: 
DCARv2_Chr7:15338138..15338353+
Sequence: 
CCTCCTCTTTCGGTTGCATAAACCAATTCAATTGCTCGTTGTTGTTGTTG
TTGTTGTTCTCGAATAATATTCGTAGAGGTAACAAACTGGCCATTGAAAT
TGAGGGAGTGGCCGTCGGTTAAGCGCAGCTCCGAAAGAGGAGCTGAATTC
TTCGAATCAAGCGGCACTGAATATATGTCGAAAGAATACATGCTTCTGCT
TCCCAAAGTAGCG
Sequences: 
>MK002208_ESSR_103 ID=MK002208_ESSR_103; Name=MK002208 ESSR-103; organism=Daucus carota; type=genetic_marker
CCTCCTCTTTCGGTTGCATAAACCAATTCAATTGCTCGTTGTTGTTGTTG
TTGTTGTTCTCGAATAATATTCGTAGAGGTAACAAACTGGCCATTGAAAT
TGAGGGAGTGGCCGTCGGTTAAGCGCAGCTCCGAAAGAGGAGCTGAATTC
TTCGAATCAAGCGGCACTGAATATATGTCGAAAGAATACATGCTTCTGCT
TCCCAAAGTAGCG
This is the primary representative sequence for this feature.
Sequence Length: 
213
Repeat Motif: 
(GTT)7