MK002210 ESSR-105

Resource Type: 
Genetic Marker
Name: 
MK002210 ESSR-105
Identifier: 
MK002210_ESSR_105
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
  2. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
  3. Yildiz M, Willis DK, Cavagnaro PF, Iorizzo M, Abak K, Simon PW. Expression and mapping of anthocyanin biosynthesis genes in carrot. Theoretical and Applied Genetics. 2013; 126(7):1689-1702.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK002210 ESSR-105, is adjacent to primer, ESSR-105-F.
The genetic_marker, MK002210 ESSR-105, is adjacent to primer, ESSR-105-R.
The genetic_marker, MK002210 ESSR-105, is adjacent to gene, DCAR_010440.
The genetic_marker, MK002210 ESSR-105, is located in gene, LOC108211076.
The marker_locus, ESSR-105, is an instance of genetic_marker, MK002210 ESSR-105.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 J.Parsons Th. Br1091×HM1F3Chr343.213ESSR-105MapViewer
2011 SS10611061-331.999ESSR-105MapViewer
2011 SS1061QTL1061QTL-142.52ESSR-105MapViewer
2013 10117 BLG0392.9ESSR-105MapViewer
2013 10117 ALG0358.5ESSR-105MapViewer
Synonyms: 
  • MK002210
Sequence Coordinates: 
DCARv2_Chr3:23156866..23157053+
View location in JBrowse: 
DCARv2_Chr3:23156866..23157053+
Sequence: 
TCAATTACAGGCACAGAGCGTTTTCAGAGTGTGAGATGGCAGCAGCAGCA
GCGAGGGCCTGGTTTAGCAGCAGCTGCATTCACAATACATATATATGTAT
GCATCCACATGACGCTCTCGTCCTCGCCGCCAACAACAATTTTAAACTGC
AAACACGACGTCGTTCCTCCACCTCATCCATCAATTCC
Sequences: 
>MK002210_ESSR_105 ID=MK002210_ESSR_105; Name=MK002210 ESSR-105; organism=Daucus carota; type=genetic_marker
TCAATTACAGGCACAGAGCGTTTTCAGAGTGTGAGATGGCAGCAGCAGCA
GCGAGGGCCTGGTTTAGCAGCAGCTGCATTCACAATACATATATATGTAT
GCATCCACATGACGCTCTCGTCCTCGCCGCCAACAACAATTTTAAACTGC
AAACACGACGTCGTTCCTCCACCTCATCCATCAATTCC
This is the primary representative sequence for this feature.
Sequence Length: 
188
Repeat Motif: 
(GCA)4