MK002154 ESSR-049

Resource Type: 
Genetic Marker
Name: 
MK002154 ESSR-049
Identifier: 
MK002154_ESSR_049
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  2. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK002154 ESSR-049, is adjacent to primer, ESSR-049-F.
The genetic_marker, MK002154 ESSR-049, is adjacent to primer, ESSR-049-R.
The genetic_marker, MK002154 ESSR-049, is located in gene, DCAR_016495.
The genetic_marker, MK002154 ESSR-049, is located in gene, LOC108219707.
The marker_locus, ESSR-049, is an instance of genetic_marker, MK002154 ESSR-049.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2015 SFF×HM2Chr511.552ESSR-049MapViewer
2015 MB MergedChr59.397ESSR-049MapViewer
2014 J.Parsons Th. SFF×HM2Chr511.552ESSR-049MapViewer
2014 J.Parsons Th. Fig_3.5Chr59.397ESSR-049MapViewer
2014 J.Parsons Th. Fig_2.4Chr59.397ESSR-049MapViewer
Synonyms: 
  • MK002154
Sequence Coordinates: 
DCARv2_Chr5:4055371..4055593-
View location in JBrowse: 
DCARv2_Chr5:4055371..4055593-
Sequence: 
CGAACTCATCCACCCCTCTACCACCACCTCCGCCGCCGCCGCCACCAGCC
ACCCAGCTCGCCGGCGAGGCCGACCCCGCAAAACCCAACCCCATGAACCC
AATCAAATAAATTCCCCAAAACGACAAGCAATTGATCAAAACGGCAATGC
CAACGGGGTTGTTGATCATCATGGTTCAGAGGATTGGGAGAATGTGGCTA
AAGTTGTGCCC
Sequences: 
>MK002154_ESSR_049 ID=MK002154_ESSR_049; Name=MK002154 ESSR-049; organism=Daucus carota; type=genetic_marker
CGAACTCATCCACCCCTCTACCACCACCTCCGCCGCCGCCGCCACCAGCC
ACCCAGCTCGCCGGCGAGGCCGACCCCGCAAAACCCAACCCCATGAACCC
AATCAAATAAATTCCCCAAAACGACAAGCAATTGATCAAAACGGCAATGC
CAACGGGGTTGTTGATCATCATGGTTCAGAGGATTGGGAGAATGTGGCTA
AAGTTGTGCCC
This is the primary representative sequence for this feature.
Sequence Length: 
211