MK002160 ESSR-055

Resource Type: 
Genetic Marker
Name: 
MK002160 ESSR-055
Identifier: 
MK002160_ESSR_055
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SSR
Publication: 
  1. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  2. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK002160 ESSR-055, is adjacent to primer, ESSR-055-F.
The genetic_marker, MK002160 ESSR-055, is adjacent to primer, ESSR-055-R.
The genetic_marker, MK002160 ESSR-055, is located in gene, DCAR_001284.
The genetic_marker, MK002160 ESSR-055, is located in gene, LOC108205221.
The marker_locus, ESSR-055, is an instance of genetic_marker, MK002160 ESSR-055.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 J.Parsons Th. SFF×HM2Chr110.044ESSR-055MapViewer
2015 MB MergedChr112.645ESSR-055MapViewer
2014 J.Parsons Th. Fig_2.4Chr112.645ESSR-055MapViewer
2014 J.Parsons Th. Fig_3.5Chr112.645ESSR-055MapViewer
2015 SFF×HM2Chr110.044ESSR-055MapViewer
Synonyms: 
  • MK002160
Sequence Coordinates: 
DCARv2_Chr1:4065185..4065518+
View location in JBrowse: 
DCARv2_Chr1:4065185..4065518+
Sequence: 
TTAACATCAATGTCGCGCTTGTCGTAACCTTTATCATAATCTTCATCAGT
GCTAGCATCATAGTAATCATCATCATCTTCATCGTCATCAAAATCATCCT
TGTCCTTCACCATCAACTGTTCTTGAATGCGATCCCTAATAGCAGTTCCC
ATTTTATGACAGCCTTCTTCAAACATCTCAAGAAAACCAGCAACCATGC
Sequences: 
>MK002160_ESSR_055 ID=MK002160_ESSR_055; Name=MK002160 ESSR-055; organism=Daucus carota; type=genetic_marker
TTAACATCAATGTCGCGCTTGTCGTAACCTTTATCATAATCTTCATCAGT
GCTAGCATCATAGTAATCATCATCATCTTCATCGTCATCAAAATCATCCT
TGTCCTTCACCATCAACTGTTCTTGAATGCGATCCCTAATAGCAGTTCCC
ATTTTATGACAGCCTTCTTCAAACATCTCAAGAAAACCAGCAACCATGC
This is the primary representative sequence for this feature.
Sequence Length: 
199