MK002203 ESSR-098 | CarrotOmics

Resource Type:

Genetic Marker

Name:

MK002203 ESSR-098

Identifier:

MK002203_ESSR_098

Organism:

Daucus carota subspecies sativus

Marker Type:

SSR

Publication:

Salgon Sylvia. Phenotyping and pigment analysis in carrot (Daucus carota L.) and genetic mapping with SSR markers and candidate genes. M.S. Thesis. 2011. Ministère de l'Agriculture Montpellier
Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison

Relationship:

There are 5 relationships.
Relationships
The genetic_marker, MK002203 ESSR-098, is adjacent to primer, ESSR-098-F.
The genetic_marker, MK002203 ESSR-098, is adjacent to primer, ESSR-098-R.
The genetic_marker, MK002203 ESSR-098, is located in gene, DCAR_026400.
The genetic_marker, MK002203 ESSR-098, is located in gene, LOC108195094.
The marker_locus, ESSR-098, is an instance of genetic_marker, MK002203 ESSR-098.

MapViewer Marker Map Positions:


Map Name	Linkage Group	Position	Locus	MapViewer
2013 Criolla×Bienal	7	23.4	ESSR-098	MapViewer
2015 MB Merged	Chr7	46.929	ESSR-098	MapViewer
2015 SFF×HM2	Chr7	40.29	ESSR-098	MapViewer
2011 SS1061QTL	1061QTL-8	5.29	ESSR-098	MapViewer
2014 J.Parsons Th. Fig_2.4	Chr7	46.929	ESSR-098	MapViewer
2014 J.Parsons Th. SFF×HM2	Chr7	40.29	ESSR-098	MapViewer
2014 J.Parsons Th. Fig_3.5	Chr7	46.929	ESSR-098	MapViewer
2011 SS1061	1061-7a	0	ESSR-098	MapViewer

Synonyms:

MK002203

Sequence Coordinates:

DCARv2_Chr7:35968965..35969266-

View location in JBrowse:

DCARv2_Chr7:35968965..35969266-

Sequence:

AACCGCAGTTTTCTTCATGGTGTTTGCTATTCCTTCTACTATACACACTG
CGCATCTTAAATTCTTTACGAGGTCGAATGCTGTTATGAAAAAATGGGAT
TCTGTCAATCTGGTCCTTGTCTTGGTGGCTTTGTTCTTCGGATTTATAAG
TAAAAACAACAACAGAAATTATAATAATGTTGTTGCTGATGATATACAGA
GTACTACTACTACTACATCTGATAATAATCAGAACTACTATAATTATCAT
CTTCC

Sequences:

Primary genetic marker Sequence (255bp)

>MK002203_ESSR_098 ID=MK002203_ESSR_098; Name=MK002203 ESSR-098; organism=Daucus carota; type=genetic_marker
AACCGCAGTTTTCTTCATGGTGTTTGCTATTCCTTCTACTATACACACTG
CGCATCTTAAATTCTTTACGAGGTCGAATGCTGTTATGAAAAAATGGGAT
TCTGTCAATCTGGTCCTTGTCTTGGTGGCTTTGTTCTTCGGATTTATAAG
TAAAAACAACAACAGAAATTATAATAATGTTGTTGCTGATGATATACAGA
GTACTACTACTACTACATCTGATAATAATCAGAACTACTATAATTATCAT
CTTCC

This is the primary representative sequence for this feature.

Sequence Length:

255