MK002819 K0263

Resource Type: 
Genetic Marker
Name: 
MK002819 K0263
Identifier: 
MK002819_K0263
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
  3. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  4. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002819 K0263, is adjacent to primer, K0263_X.
The genetic_marker, MK002819 K0263, is adjacent to primer, K0263_Y.
The genetic_marker, MK002819 K0263, is adjacent to primer, K0263_Common.
The genetic_marker, MK002819 K0263, is located in gene, DCAR_025292.
The genetic_marker, MK002819 K0263, is located in gene, LOC108193418.
The marker_locus, K0263, is an instance of genetic_marker, MK002819 K0263.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 70349Chromosome_712.945K0263MapViewer
2014 J.Parsons Th. Br1091×HM1Chr79.393K0263MapViewer
2015 Br1091×HM1Chr79.393K0263MapViewer
2016 Integ NG full mapCH744.845K0263MapViewer
2016 80592 NG bin mapChr79.393K0263MapViewer
2015 MB MergedChr738.536K0263MapViewer
2016 70349 NG full mapChr712.945K0263MapViewer
2016 70349 NG bin mapChr712.945K0263MapViewer
2016 80592 NG full mapChr79.393K0263MapViewer
2016 Integ NG bin mapCH746.046K0263MapViewer
2014 J.Parsons Th. Fig_2.4Chr738.536K0263MapViewer
2014 J.Parsons Th. Fig_4.4F2_Chr738.536K0263MapViewer
2014 J.Parsons Th. Fig_3.5Chr738.536K0263MapViewer
Synonyms: 
  • MK002819
Sequence Coordinates: 
DCARv2_Chr7:25600442..25600496-
View location in JBrowse: 
Sequence: 
TTGCTCTCTCTGGTCTTCAAATTGATAACTTAGATATWAAAAATCTTCCT
GCACGCCCTTACAAAGGTTTC
Sequences: 
>MK002819_K0263 ID=MK002819_K0263; Name=MK002819 K0263; organism=Daucus carota; type=genetic_marker
TTGCTCTCTCTGGTCTTCAAATTGATAACTTAGATATWAAAAATCTTCCT
GCACGCCCTTACAAAGGTTTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTGCTCTCTCTGGTCTTCAAATTGATAACTTAGATAT
Three Prime Flanking Region: 
AAAAATCTTCCTGCACGCCCTTACAAAGGTTTC
SNP: 
A/T