Resource Type:
Genetic Marker
Name:
MK003602 K1046
Identifier:
MK003602_K1046
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship:
| Relationships |
|---|
| The genetic_marker, MK003602 K1046, is adjacent to primer, K1046_X. |
| The genetic_marker, MK003602 K1046, is adjacent to primer, K1046_Y. |
| The genetic_marker, MK003602 K1046, is adjacent to primer, K1046_Common. |
| The genetic_marker, MK003602 K1046, is located in gene, LOC108203121. |
| The marker_locus, K1046, is an instance of genetic_marker, MK003602 K1046. |
MapViewer Marker Map Positions:
| Map Name | Linkage Group | Position | Locus | MapViewer |
|---|---|---|---|---|
| 2014 J.Parsons Th. Fig_3.5 | Chr9 | 9.562 | K1046 | MapViewer |
| 2016 Integ NG bin map | CH9 | 5.917 | K1046 | MapViewer |
| 2016 70796 NG full map | Chr9 | 6.184 | K1046 | MapViewer |
| 2014 J.Parsons Th. HM3 | Chr9 | 9.419 | K1046 | MapViewer |
| 2015 MB Merged | Chr9 | 9.562 | K1046 | MapViewer |
| 2016 70796 NG bin map | Chr9 | 6.184 | K1046 | MapViewer |
| 2015 HM3 | Chr9 | 9.419 | K1046 | MapViewer |
| 2016 Integ NG full map | CH9 | 4.797 | K1046 | MapViewer |
| 2014 J.Parsons Th. Fig_2.4 | Chr9 | 9.562 | K1046 | MapViewer |
Synonyms:
- MK003602
Sequence Coordinates:
DCARv2_Chr9:2229416..2229470+
View location in JBrowse:
Sequence:
ACATCACTAATCTCACGAGTCTTGGCCTATCGGTTGTWCTAAATGTTAAT
TGGCAAGTCAAAGTGTTGTTC
Sequences:
>MK003602_K1046 ID=MK003602_K1046; Name=MK003602 K1046; organism=Daucus carota; type=genetic_marker
ACATCACTAATCTCACGAGTCTTGGCCTATCGGTTGTWCTAAATGTTAAT
TGGCAAGTCAAAGTGTTGTTC
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
ACATCACTAATCTCACGAGTCTTGGCCTATCGGTTGT
Three Prime Flanking Region:
CTAAATGTTAATTGGCAAGTCAAAGTGTTGTTC
SNP:
A/T