MK003659 K1103

Resource Type: 
Genetic Marker
Name: 
MK003659 K1103
Identifier: 
MK003659_K1103
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003659 K1103, is adjacent to primer, K1103_X.
The genetic_marker, MK003659 K1103, is adjacent to primer, K1103_Y.
The genetic_marker, MK003659 K1103, is adjacent to primer, K1103_Common.
The genetic_marker, MK003659 K1103, is located in gene, DCAR_016954.
The genetic_marker, MK003659 K1103, is located in gene, LOC108220495.
The marker_locus, K1103, is an instance of genetic_marker, MK003659 K1103.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 J.Parsons Th. Fig_2.4Chr517.898K1103MapViewer
2016 70796 NG bin mapChr551.923K1103MapViewer
2014 J.Parsons Th. Fig_3.5Chr517.898K1103MapViewer
2016 Integ NG full mapCH523.694K1103MapViewer
2015 MB MergedChr517.898K1103MapViewer
2016 Integ NG bin mapCH523.235K1103MapViewer
2015 Br1091×HM1Chr515.601K1103MapViewer
2016 80592 NG bin mapChr515.601K1103MapViewer
2016 70796 NG full mapChr551.923K1103MapViewer
2016 80592 NG full mapChr515.601K1103MapViewer
2015 SFF×HM2Chr520.345K1103MapViewer
2014 J.Parsons Th. SFF×HM2Chr520.345K1103MapViewer
2014 J.Parsons Th. Br1091×HM1Chr515.601K1103MapViewer
2014 J.Parsons Th. Fig_4.4F2_Chr517.065K1103MapViewer
Synonyms: 
  • MK003659
Sequence Coordinates: 
DCARv2_Chr5:9470102..9470153-
View location in JBrowse: 
Sequence: 
GAGGCCAAAATTGCTGAGATAGAAGCTCTTCTAAAATMTTTCGAAGATGA
GAAAGATGCTCTAGAAAGCAA
Sequences: 
>MK003659_K1103 ID=MK003659_K1103; Name=MK003659 K1103; organism=Daucus carota; type=genetic_marker
GAGGCCAAAATTGCTGAGATAGAAGCTCTTCTAAAATMTTTCGAAGATGA
GAAAGATGCTCTAGAAAGCAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GAGGCCAAAATTGCTGAGATAGAAGCTCTTCTAAAAT
Three Prime Flanking Region: 
TTTCGAAGATGAGAAAGATGCTCTAGAAAGCAA
SNP: 
A/C