Resource Type:
Genetic Marker
Name:
MK004155 K1599
Identifier:
MK004155_K1599
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship:
| Relationships |
|---|
| The genetic_marker, MK004155 K1599, is adjacent to primer, K1599_X. |
| The genetic_marker, MK004155 K1599, is adjacent to primer, K1599_Y. |
| The genetic_marker, MK004155 K1599, is adjacent to primer, K1599_Common. |
| The genetic_marker, MK004155 K1599, is located in gene, DCAR_001700. |
| The genetic_marker, MK004155 K1599, is located in gene, LOC108204893. |
| The marker_locus, K1599, is an instance of genetic_marker, MK004155 K1599. |
MapViewer Marker Map Positions:
Synonyms:
- MK004155
Sequence Coordinates:
DCARv2_Chr1:19411121..19411165-
View location in JBrowse:
Sequence:
TGAGGTATCGGTGTAGGATGACCTGGAAAGGTGTCTTYACCAGCTTGAAT
AGCAGGACCATAAGTACCTCT
Sequences:
>MK004155_K1599 ID=MK004155_K1599; Name=MK004155 K1599; organism=Daucus carota; type=genetic_marker
TGAGGTATCGGTGTAGGATGACCTGGAAAGGTGTCTTYACCAGCTTGAAT
AGCAGGACCATAAGTACCTCT
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
TGAGGTATCGGTGTAGGATGACCTGGAAAGGTGTCTT
Three Prime Flanking Region:
ACCAGCTTGAATAGCAGGACCATAAGTACCTCT
SNP:
C/T