MK004352 K1796

Resource Type: 
Genetic Marker
Name: 
MK004352 K1796
Identifier: 
MK004352_K1796
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004352 K1796, is adjacent to primer, K1796_X.
The genetic_marker, MK004352 K1796, is adjacent to primer, K1796_Y.
The genetic_marker, MK004352 K1796, is adjacent to primer, K1796_Common.
The genetic_marker, MK004352 K1796, is located in gene, DCAR_024024.
The genetic_marker, MK004352 K1796, is located in gene, LOC108193339.
The marker_locus, K1796, is an instance of genetic_marker, MK004352 K1796.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2015 Br1091×HM1Chr724.871K1796MapViewer
2016 80592 NG bin mapChr724.871K1796MapViewer
2014 J.Parsons Th. Fig_4.4F2_Chr723.058K1796MapViewer
2016 80592 NG full mapChr724.871K1796MapViewer
2015 MB MergedChr723.058K1796MapViewer
2014 J.Parsons Th. Fig_2.4Chr723.058K1796MapViewer
2014 J.Parsons Th. Br1091×HM1Chr724.871K1796MapViewer
2016 Integ NG bin mapCH728.803K1796MapViewer
2014 J.Parsons Th. Fig_3.5Chr723.058K1796MapViewer
2016 Integ NG full mapCH728.194K1796MapViewer
Synonyms: 
  • MK004352
Sequence Coordinates: 
DCARv2_Chr7:8075984..8076060-
View location in JBrowse: 
Sequence: 
TCGGKCTGAATGAAATGCTTACCGTTTTGTCTCGACTRTGTCTTTGATTA
ATAGTTTTTTCTTTTATGGTT
Sequences: 
>MK004352_K1796 ID=MK004352_K1796; Name=MK004352 K1796; organism=Daucus carota; type=genetic_marker
TCGGKCTGAATGAAATGCTTACCGTTTTGTCTCGACTRTGTCTTTGATTA
ATAGTTTTTTCTTTTATGGTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCGGKCTGAATGAAATGCTTACCGTTTTGTCTCGACT
Three Prime Flanking Region: 
TGTCTTTGATTAATAGTTTTTTCTTTTATGGTT
SNP: 
A/G