MK004366 K1810

Resource Type: 
Genetic Marker
Name: 
MK004366 K1810
Identifier: 
MK004366_K1810
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004366 K1810, is adjacent to primer, K1810_X.
The genetic_marker, MK004366 K1810, is adjacent to primer, K1810_Y.
The genetic_marker, MK004366 K1810, is adjacent to primer, K1810_Common.
The genetic_marker, MK004366 K1810, is located in gene, DCAR_004373.
The genetic_marker, MK004366 K1810, is located in gene, LOC108212000.
The marker_locus, K1810, is an instance of genetic_marker, MK004366 K1810.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2015 Br1091×HM1Chr114.062K1810MapViewer
2014 J.Parsons Th. Br1091×HM1Chr114.062K1810MapViewer
2016 Integ NG full mapCH162.376K1810MapViewer
2016 80592 NG bin mapChr114.062K1810MapViewer
2016 80592 NG full mapChr114.062K1810MapViewer
Synonyms: 
  • MK004366
Sequence Coordinates: 
DCARv2_Chr1:47379203..47379250+
View location in JBrowse: 
DCARv2_Chr1:47379203..47379250+
Sequence: 
TGGGGAAGCTGATGGAGAAGGTGGGAGTGGAGAAGTAYTATGTAGTTGGG
ACTAGTTATGGTGGATTTGTG
Sequences: 
>MK004366_K1810 ID=MK004366_K1810; Name=MK004366 K1810; organism=Daucus carota; type=genetic_marker
TGGGGAAGCTGATGGAGAAGGTGGGAGTGGAGAAGTAYTATGTAGTTGGG
ACTAGTTATGGTGGATTTGTG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGGGGAAGCTGATGGAGAAGGTGGGAGTGGAGAAGTA
Three Prime Flanking Region: 
TATGTAGTTGGGACTAGTTATGGTGGATTTGTG
SNP: 
C/T