MK004508 K1952

Resource Type: 
Genetic Marker
Name: 
MK004508 K1952
Identifier: 
MK004508_K1952
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004508 K1952, is adjacent to primer, K1952_X.
The genetic_marker, MK004508 K1952, is adjacent to primer, K1952_Y.
The genetic_marker, MK004508 K1952, is adjacent to primer, K1952_Common.
The genetic_marker, MK004508 K1952, is located in gene, DCAR_030836.
The genetic_marker, MK004508 K1952, is located in gene, LOC108200617.
The marker_locus, K1952, is an instance of genetic_marker, MK004508 K1952.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 J.Parsons Th. Fig_3.5Chr946.668K1952MapViewer
2015 MB MergedChr946.668K1952MapViewer
2016 Integ NG bin mapCH945.329K1952MapViewer
2016 Integ NG full mapCH944.185K1952MapViewer
2014 J.Parsons Th. Fig_2.4Chr946.668K1952MapViewer
2014 J.Parsons Th. SFF×HM2Chr948.546K1952MapViewer
2015 SFF×HM2Chr948.546K1952MapViewer
2014 J.Parsons Th. Br1091×HM1Chr941.566K1952MapViewer
2016 70796 NG full mapChr949.791K1952MapViewer
2015 Br1091×HM1Chr941.566K1952MapViewer
2016 80592 NG full mapChr941.566K1952MapViewer
Synonyms: 
  • MK004508
Sequence Coordinates: 
DCARv2_Chr9:30303663..30303716+
View location in JBrowse: 
Sequence: 
CTACCACTGTCACATACTTGGAGAAAAAACGATGTGTRGAACCTAGTGCC
ACCACCGCAGAGCTACTTCTC
Sequences: 
>MK004508_K1952 ID=MK004508_K1952; Name=MK004508 K1952; organism=Daucus carota; type=genetic_marker
CTACCACTGTCACATACTTGGAGAAAAAACGATGTGTRGAACCTAGTGCC
ACCACCGCAGAGCTACTTCTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTACCACTGTCACATACTTGGAGAAAAAACGATGTGT
Three Prime Flanking Region: 
GAACCTAGTGCCACCACCGCAGAGCTACTTCTC
SNP: 
A/G