MK005149 K2593

Resource Type: 
Genetic Marker
Name: 
MK005149 K2593
Identifier: 
MK005149_K2593
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005149 K2593, is adjacent to primer, K2593_X.
The genetic_marker, MK005149 K2593, is adjacent to primer, K2593_Y.
The genetic_marker, MK005149 K2593, is adjacent to primer, K2593_Common.
The genetic_marker, MK005149 K2593, is located in gene, DCAR_001247.
The genetic_marker, MK005149 K2593, is located in gene, LOC108204447.
The marker_locus, K2593, is an instance of genetic_marker, MK005149 K2593.
Loading content
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 J.Parsons Th. Fig_2.4Chr110.933K2593MapViewer
2016 80592 NG full mapChr163.833K2593MapViewer
2015 Br1091×HM1Chr163.833K2593MapViewer
2014 J.Parsons Th. Br1091×HM1Chr163.833K2593MapViewer
2014 J.Parsons Th. SFF×HM2Chr18.623K2593MapViewer
2015 HM3Chr11.571K2593MapViewer
2014 J.Parsons Th. HM3Chr11.571K2593MapViewer
2014 J.Parsons Th. Fig_3.5Chr110.933K2593MapViewer
2015 SFF×HM2Chr18.623K2593MapViewer
2015 MB MergedChr110.933K2593MapViewer
2016 Integ NG full mapCH112.421K2593MapViewer
Synonyms: 
  • MK005149
Sequence Coordinates: 
DCARv2_Chr1:3612312..3612363-
View location in JBrowse: 
Sequence: 
TAGGGTAYCATTATTTGATAAATCATGGGATTTATTTRGCCACATTGCCT
GCACTTGTGGTTTTGTTTGGA
Sequences: 
>MK005149_K2593 ID=MK005149_K2593; Name=MK005149 K2593; organism=Daucus carota; type=genetic_marker
TAGGGTAYCATTATTTGATAAATCATGGGATTTATTTRGCCACATTGCCT
GCACTTGTGGTTTTGTTTGGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TAGGGTAYCATTATTTGATAAATCATGGGATTTATTT
Three Prime Flanking Region: 
GCCACATTGCCTGCACTTGTGGTTTTGTTTGGA
SNP: 
A/G