Resource Type:
Genetic Marker
Name:
MK005149 K2593
Identifier:
MK005149_K2593
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship:
Relationships |
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The genetic_marker, MK005149 K2593, is adjacent to primer, K2593_X. |
The genetic_marker, MK005149 K2593, is adjacent to primer, K2593_Y. |
The genetic_marker, MK005149 K2593, is adjacent to primer, K2593_Common. |
The genetic_marker, MK005149 K2593, is located in gene, DCAR_001247. |
The genetic_marker, MK005149 K2593, is located in gene, LOC108204447. |
The marker_locus, K2593, is an instance of genetic_marker, MK005149 K2593. |

MapViewer Marker Map Positions:
Map Name | Linkage Group | Position | Locus | MapViewer |
---|---|---|---|---|
2014 J.Parsons Th. Fig_2.4 | Chr1 | 10.933 | K2593 | MapViewer |
2016 80592 NG full map | Chr1 | 63.833 | K2593 | MapViewer |
2015 Br1091×HM1 | Chr1 | 63.833 | K2593 | MapViewer |
2014 J.Parsons Th. Br1091×HM1 | Chr1 | 63.833 | K2593 | MapViewer |
2014 J.Parsons Th. SFF×HM2 | Chr1 | 8.623 | K2593 | MapViewer |
2015 HM3 | Chr1 | 1.571 | K2593 | MapViewer |
2014 J.Parsons Th. HM3 | Chr1 | 1.571 | K2593 | MapViewer |
2014 J.Parsons Th. Fig_3.5 | Chr1 | 10.933 | K2593 | MapViewer |
2015 SFF×HM2 | Chr1 | 8.623 | K2593 | MapViewer |
2015 MB Merged | Chr1 | 10.933 | K2593 | MapViewer |
2016 Integ NG full map | CH1 | 12.421 | K2593 | MapViewer |
Synonyms:
- MK005149
Sequence Coordinates:
DCARv2_Chr1:3612312..3612363-
View location in JBrowse:
Sequence:
TAGGGTAYCATTATTTGATAAATCATGGGATTTATTTRGCCACATTGCCT
GCACTTGTGGTTTTGTTTGGA
Sequences:
>MK005149_K2593 ID=MK005149_K2593; Name=MK005149 K2593; organism=Daucus carota; type=genetic_marker
TAGGGTAYCATTATTTGATAAATCATGGGATTTATTTRGCCACATTGCCT
GCACTTGTGGTTTTGTTTGGA
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
TAGGGTAYCATTATTTGATAAATCATGGGATTTATTT
Three Prime Flanking Region:
GCCACATTGCCTGCACTTGTGGTTTTGTTTGGA
SNP:
A/G