MK005699 K3143

Resource Type: 
Genetic Marker
Name: 
MK005699 K3143
Identifier: 
MK005699_K3143
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005699 K3143, is adjacent to primer, K3143_X.
The genetic_marker, MK005699 K3143, is adjacent to primer, K3143_Y.
The genetic_marker, MK005699 K3143, is adjacent to primer, K3143_Common.
The genetic_marker, MK005699 K3143, is located in gene, DCAR_002537.
The genetic_marker, MK005699 K3143, is located in gene, LOC108205503.
The marker_locus, K3143, is an instance of genetic_marker, MK005699 K3143.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG bin mapChr127.329K3143MapViewer
2016 80592 NG full mapChr127.329K3143MapViewer
2015 MB MergedChr147.27K3143MapViewer
2015 HM3Chr156.758K3143MapViewer
2014 J.Parsons Th. Br1091×HM1Chr127.329K3143MapViewer
2016 Integ NG bin mapCH151.415K3143MapViewer
2014 J.Parsons Th. HM3Chr156.758K3143MapViewer
2016 70796 NG full mapChr124.976K3143MapViewer
2014 J.Parsons Th. Fig_2.4Chr147.27K3143MapViewer
2015 Br1091×HM1Chr127.329K3143MapViewer
2014 J.Parsons Th. Fig_3.5Chr147.27K3143MapViewer
2016 Integ NG full mapCH146.501K3143MapViewer
Synonyms: 
  • MK005699
Sequence Coordinates: 
DCARv2_Chr1:30296738..30296788-
View location in JBrowse: 
Sequence: 
CGAAGAGGCTGAAAGAAGAGTATGAGGATGACTCAGGYGCTGCCTTACCA
CCATGGCTTGAAGCAAGGCAA
Sequences: 
>MK005699_K3143 ID=MK005699_K3143; Name=MK005699 K3143; organism=Daucus carota; type=genetic_marker
CGAAGAGGCTGAAAGAAGAGTATGAGGATGACTCAGGYGCTGCCTTACCA
CCATGGCTTGAAGCAAGGCAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CGAAGAGGCTGAAAGAAGAGTATGAGGATGACTCAGG
Three Prime Flanking Region: 
GCTGCCTTACCACCATGGCTTGAAGCAAGGCAA
SNP: 
C/T