MK006162 K3606

Resource Type: 
Genetic Marker
Name: 
MK006162 K3606
Identifier: 
MK006162_K3606
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006162 K3606, is adjacent to primer, K3606_X.
The genetic_marker, MK006162 K3606, is adjacent to primer, K3606_Y.
The genetic_marker, MK006162 K3606, is adjacent to primer, K3606_Common.
The genetic_marker, MK006162 K3606, is located in gene, DCAR_025817.
The genetic_marker, MK006162 K3606, is located in gene, LOC108193130.
The marker_locus, K3606, is an instance of genetic_marker, MK006162 K3606.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG bin mapChr77.171K3606MapViewer
2016 80592 NG full mapChr77.171K3606MapViewer
2014 J.Parsons Th. Br1091×HM1Chr77.171K3606MapViewer
2016 Integ NG full mapCH746.832K3606MapViewer
2014 J.Parsons Th. Fig_4.4F2_Chr740.758K3606MapViewer
2015 MB MergedChr740.758K3606MapViewer
2015 Br1091×HM1Chr77.171K3606MapViewer
2014 J.Parsons Th. Fig_3.5Chr740.758K3606MapViewer
2014 J.Parsons Th. Fig_2.4Chr740.758K3606MapViewer
2016 Integ NG bin mapCH748.143K3606MapViewer
Synonyms: 
  • MK006162
Sequence Coordinates: 
DCARv2_Chr7:30927286..30927331+
View location in JBrowse: 
Sequence: 
TAGGCAGCATTTCTACCAATTGTGGTACAGCACCAACRGCTACAATCAGG
TTCCGGACCTCTGCATGCAGG
Sequences: 
>MK006162_K3606 ID=MK006162_K3606; Name=MK006162 K3606; organism=Daucus carota; type=genetic_marker
TAGGCAGCATTTCTACCAATTGTGGTACAGCACCAACRGCTACAATCAGG
TTCCGGACCTCTGCATGCAGG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TAGGCAGCATTTCTACCAATTGTGGTACAGCACCAAC
Three Prime Flanking Region: 
GCTACAATCAGGTTCCGGACCTCTGCATGCAGG
SNP: 
A/G