MK006299 K3743

Resource Type: 
Genetic Marker
Name: 
MK006299 K3743
Identifier: 
MK006299_K3743
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006299 K3743, is adjacent to primer, K3743_X.
The genetic_marker, MK006299 K3743, is adjacent to primer, K3743_Y.
The genetic_marker, MK006299 K3743, is adjacent to primer, K3743_Common.
The genetic_marker, MK006299 K3743, is located in gene, DCAR_002721.
The genetic_marker, MK006299 K3743, is located in gene, LOC108204484.
The marker_locus, K3743, is an instance of genetic_marker, MK006299 K3743.
Loading content
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH148.289K3743MapViewer
2014 J.Parsons Th. Br1091×HM1Chr127.329K3743MapViewer
2014 J.Parsons Th. Fig_3.5Chr148.803K3743MapViewer
2015 Br1091×HM1Chr127.329K3743MapViewer
2014 J.Parsons Th. HM3Chr159.429K3743MapViewer
2015 MB MergedChr148.803K3743MapViewer
2015 HM3Chr159.429K3743MapViewer
2014 J.Parsons Th. Fig_2.4Chr148.803K3743MapViewer
2016 80592 NG full mapChr127.329K3743MapViewer
Synonyms: 
  • MK006299
Sequence Coordinates: 
DCARv2_Chr1:32292805..32292858+
View location in JBrowse: 
Sequence: 
GTGGACTMAATTCTGAGGCTCAAGCACAAGAATCTCCMATTGCTATTTCT
ACTAGAAGTCTTTCTTGGAGT
Sequences: 
>MK006299_K3743 ID=MK006299_K3743; Name=MK006299 K3743; organism=Daucus carota; type=genetic_marker
GTGGACTMAATTCTGAGGCTCAAGCACAAGAATCTCCMATTGCTATTTCT
ACTAGAAGTCTTTCTTGGAGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTGGACTMAATTCTGAGGCTCAAGCACAAGAATCTCC
Three Prime Flanking Region: 
ATTGCTATTTCTACTAGAAGTCTTTCTTGGAGT
SNP: 
A/C