Resource Type:
Genetic Marker
Name:
MK006299 K3743
Identifier:
MK006299_K3743
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship:
Relationships |
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The genetic_marker, MK006299 K3743, is adjacent to primer, K3743_X. |
The genetic_marker, MK006299 K3743, is adjacent to primer, K3743_Y. |
The genetic_marker, MK006299 K3743, is adjacent to primer, K3743_Common. |
The genetic_marker, MK006299 K3743, is located in gene, DCAR_002721. |
The genetic_marker, MK006299 K3743, is located in gene, LOC108204484. |
The marker_locus, K3743, is an instance of genetic_marker, MK006299 K3743. |

MapViewer Marker Map Positions:
Map Name | Linkage Group | Position | Locus | MapViewer |
---|---|---|---|---|
2016 Integ NG full map | CH1 | 48.289 | K3743 | MapViewer |
2014 J.Parsons Th. Br1091×HM1 | Chr1 | 27.329 | K3743 | MapViewer |
2014 J.Parsons Th. Fig_3.5 | Chr1 | 48.803 | K3743 | MapViewer |
2015 Br1091×HM1 | Chr1 | 27.329 | K3743 | MapViewer |
2014 J.Parsons Th. HM3 | Chr1 | 59.429 | K3743 | MapViewer |
2015 MB Merged | Chr1 | 48.803 | K3743 | MapViewer |
2015 HM3 | Chr1 | 59.429 | K3743 | MapViewer |
2014 J.Parsons Th. Fig_2.4 | Chr1 | 48.803 | K3743 | MapViewer |
2016 80592 NG full map | Chr1 | 27.329 | K3743 | MapViewer |
Synonyms:
- MK006299
Sequence Coordinates:
DCARv2_Chr1:32292805..32292858+
View location in JBrowse:
Sequence:
GTGGACTMAATTCTGAGGCTCAAGCACAAGAATCTCCMATTGCTATTTCT
ACTAGAAGTCTTTCTTGGAGT
Sequences:
>MK006299_K3743 ID=MK006299_K3743; Name=MK006299 K3743; organism=Daucus carota; type=genetic_marker
GTGGACTMAATTCTGAGGCTCAAGCACAAGAATCTCCMATTGCTATTTCT
ACTAGAAGTCTTTCTTGGAGT
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
GTGGACTMAATTCTGAGGCTCAAGCACAAGAATCTCC
Three Prime Flanking Region:
ATTGCTATTTCTACTAGAAGTCTTTCTTGGAGT
SNP:
A/C