Resource Type:
Genetic Marker
Name:
MK006333 K3777
Identifier:
MK006333_K3777
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship:
| Relationships |
|---|
| The genetic_marker, MK006333 K3777, is adjacent to primer, K3777_X. |
| The genetic_marker, MK006333 K3777, is adjacent to primer, K3777_Y. |
| The genetic_marker, MK006333 K3777, is adjacent to primer, K3777_Common. |
| The marker_locus, K3777, is an instance of genetic_marker, MK006333 K3777. |
MapViewer Marker Map Positions:
| Map Name | Linkage Group | Position | Locus | MapViewer |
|---|---|---|---|---|
| 2016 70796 NG full map | Chr9 | 54.26 | K3777 | MapViewer |
| 2015 SFF×HM2 | Chr9 | 52.426 | K3777 | MapViewer |
| 2015 Br1091×HM1 | Chr9 | 49.073 | K3777 | MapViewer |
| 2015 MB Merged | Chr9 | 53.645 | K3777 | MapViewer |
| 2014 J.Parsons Th. Fig_3.5 | Chr9 | 53.645 | K3777 | MapViewer |
| 2016 70796 NG bin map | Chr9 | 54.26 | K3777 | MapViewer |
| 2016 Integ NG full map | CH9 | 49.352 | K3777 | MapViewer |
| 2014 J.Parsons Th. SFF×HM2 | Chr9 | 52.426 | K3777 | MapViewer |
| 2014 J.Parsons Th. Br1091×HM1 | Chr9 | 49.073 | K3777 | MapViewer |
| 2016 80592 NG bin map | Chr9 | 49.073 | K3777 | MapViewer |
| 2016 Integ NG bin map | CH9 | 51.863 | K3777 | MapViewer |
| 2014 J.Parsons Th. Fig_2.4 | Chr9 | 53.645 | K3777 | MapViewer |
| 2016 80592 NG full map | Chr9 | 49.073 | K3777 | MapViewer |
Synonyms:
- MK006333
Sequence:
ATTTGTCCTGGCTTCCTTATCTGCCCTGGCTGCTGGCRTTATTGCAATAC
TCAAGCTGCCAAACCTTTCAA
Sequences:
>MK006333_K3777 ID=MK006333_K3777; Name=MK006333 K3777; organism=Daucus carota; type=genetic_marker
ATTTGTCCTGGCTTCCTTATCTGCCCTGGCTGCTGGCRTTATTGCAATAC
TCAAGCTGCCAAACCTTTCAA
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
ATTTGTCCTGGCTTCCTTATCTGCCCTGGCTGCTGGC
Three Prime Flanking Region:
TTATTGCAATACTCAAGCTGCCAAACCTTTCAA
SNP:
A/G