MK006455 K3899

Resource Type: 
Genetic Marker
Name: 
MK006455 K3899
Identifier: 
MK006455_K3899
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006455 K3899, is adjacent to primer, K3899_X.
The genetic_marker, MK006455 K3899, is adjacent to primer, K3899_Y.
The genetic_marker, MK006455 K3899, is adjacent to primer, K3899_Common.
The genetic_marker, MK006455 K3899, is located in gene, DCAR_024735.
The genetic_marker, MK006455 K3899, is located in gene, LOC108194751.
The marker_locus, K3899, is an instance of genetic_marker, MK006455 K3899.
Loading content
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr712.916K3899MapViewer
2016 80592 NG bin mapChr712.916K3899MapViewer
2014 J.Parsons Th. Fig_4.4F2_Chr735.013K3899MapViewer
2016 Integ NG bin mapCH741.697K3899MapViewer
2016 Integ NG full mapCH740.805K3899MapViewer
2014 J.Parsons Th. Fig_2.4Chr735.013K3899MapViewer
2014 J.Parsons Th. Br1091×HM1Chr712.916K3899MapViewer
2015 Br1091×HM1Chr712.916K3899MapViewer
2014 J.Parsons Th. Fig_3.5Chr735.013K3899MapViewer
2015 MB MergedChr735.013K3899MapViewer
Synonyms: 
  • MK006455
Sequence Coordinates: 
DCARv2_Chr7:18674990..18675036+
View location in JBrowse: 
Sequence: 
CCGATCTTTCCAGCAATGTTAGCAAATCTGTGGATTCRTCCGACGGAGAT
TCAAGTGGCGGTTTGAGGTCT
Sequences: 
>MK006455_K3899 ID=MK006455_K3899; Name=MK006455 K3899; organism=Daucus carota; type=genetic_marker
CCGATCTTTCCAGCAATGTTAGCAAATCTGTGGATTCRTCCGACGGAGAT
TCAAGTGGCGGTTTGAGGTCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCGATCTTTCCAGCAATGTTAGCAAATCTGTGGATTC
Three Prime Flanking Region: 
TCCGACGGAGATTCAAGTGGCGGTTTGAGGTCT
SNP: 
A/G