MK006483 K3927

Resource Type: 
Genetic Marker
Name: 
MK006483 K3927
Identifier: 
MK006483_K3927
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006483 K3927, is adjacent to primer, K3927_X.
The genetic_marker, MK006483 K3927, is adjacent to primer, K3927_Y.
The genetic_marker, MK006483 K3927, is adjacent to primer, K3927_Common.
The genetic_marker, MK006483 K3927, is adjacent to gene, DCAR_022476.
The genetic_marker, MK006483 K3927, is located in gene, LOC108227918.
The marker_locus, K3927, is an instance of genetic_marker, MK006483 K3927.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH647.503K3927MapViewer
2016 Integ NG full mapCH651.153K3927MapViewer
2014 J.Parsons Th. Fig_2.4Chr645.775K3927MapViewer
2015 Br1091×HM1Chr614.541K3927MapViewer
2014 J.Parsons Th. Fig_3.5Chr645.775K3927MapViewer
2016 70796 NG bin mapChr645.414K3927MapViewer
2014 J.Parsons Th. Br1091×HM1Chr614.541K3927MapViewer
2015 SFF×HM2Chr641.864K3927MapViewer
2016 80592 NG full mapChr614.541K3927MapViewer
2014 J.Parsons Th. SFF×HM2Chr641.864K3927MapViewer
2016 70796 NG full mapChr645.414K3927MapViewer
2016 80592 NG bin mapChr614.541K3927MapViewer
2015 MB MergedChr645.775K3927MapViewer
Synonyms: 
  • MK006483
Sequence Coordinates: 
DCARv2_Chr6:11821054..11821100-
View location in JBrowse: 
Sequence: 
TCCTCAAGTGTGTAAGAGAGCAAAGGCTGGGTTGAGAWTATCTCATTTAT
TAGCGGACTTTGCTGCCTCMT
Sequences: 
>MK006483_K3927 ID=MK006483_K3927; Name=MK006483 K3927; organism=Daucus carota; type=genetic_marker
TCCTCAAGTGTGTAAGAGAGCAAAGGCTGGGTTGAGAWTATCTCATTTAT
TAGCGGACTTTGCTGCCTCMT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCCTCAAGTGTGTAAGAGAGCAAAGGCTGGGTTGAGA
Three Prime Flanking Region: 
TATCTCATTTATTAGCGGACTTTGCTGCCTCMT
SNP: 
A/T