Resource Type:
Genetic Marker
Name:
MK003443 K0887
Identifier:
MK003443_K0887
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK003443 K0887, is adjacent to primer, K0887_X. |
| The genetic_marker, MK003443 K0887, is adjacent to primer, K0887_Y. |
| The genetic_marker, MK003443 K0887, is adjacent to primer, K0887_Common. |
| The genetic_marker, MK003443 K0887, is located in gene, DCAR_003879. |
| The genetic_marker, MK003443 K0887, is located in gene, LOC108203869. |
| The marker_locus, K0887, is an instance of genetic_marker, MK003443 K0887. |
Synonyms:
- MK003443
Sequence Coordinates:
DCARv2_Chr1:42800173..42800228-
View location in JBrowse:
Sequence:
ATTGTGGGAGTTGTAGGTTCAGTCGAAACAATTTGTTRAATAAACTAGGA
CTTCATTACCATAACTACAAT
Sequences:
>MK003443_K0887 ID=MK003443_K0887; Name=MK003443 K0887; organism=Daucus carota; type=genetic_marker
ATTGTGGGAGTTGTAGGTTCAGTCGAAACAATTTGTTRAATAAACTAGGA
CTTCATTACCATAACTACAAT
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
ATTGTGGGAGTTGTAGGTTCAGTCGAAACAATTTGTT
Three Prime Flanking Region:
AATAAACTAGGACTTCATTACCATAACTACAAT
SNP:
A/G