Resource Type:
Genetic Marker
Name:
MK004505 K1949
Identifier:
MK004505_K1949
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK004505 K1949, is adjacent to primer, K1949_X. |
| The genetic_marker, MK004505 K1949, is adjacent to primer, K1949_Y. |
| The genetic_marker, MK004505 K1949, is adjacent to primer, K1949_Common. |
| The genetic_marker, MK004505 K1949, is located in gene, DCAR_004482. |
| The genetic_marker, MK004505 K1949, is adjacent to gene, LOC108225417. |
| The marker_locus, K1949, is an instance of genetic_marker, MK004505 K1949. |
Synonyms:
- MK004505
Sequence Coordinates:
DCARv2_Chr1:48425198..48430901-
View location in JBrowse:
Sequence:
AAYTGCCTAAYATTCTTGAAAATTTTGCACCAAAAATMGTTCGATTTCAA
CAGGAAAGGGGATGGACAACA
Sequences:
>MK004505_K1949 ID=MK004505_K1949; Name=MK004505 K1949; organism=Daucus carota; type=genetic_marker
AAYTGCCTAAYATTCTTGAAAATTTTGCACCAAAAATMGTTCGATTTCAA
CAGGAAAGGGGATGGACAACA
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
AAYTGCCTAAYATTCTTGAAAATTTTGCACCAAAAAT
Three Prime Flanking Region:
GTTCGATTTCAACAGGAAAGGGGATGGACAACA
SNP:
A/C