MK002941 K0385

Resource Type: 
Genetic Marker
Name: 
MK002941 K0385
Identifier: 
MK002941_K0385
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002941 K0385, is adjacent to primer, K0385_X.
The genetic_marker, MK002941 K0385, is adjacent to primer, K0385_Y.
The genetic_marker, MK002941 K0385, is adjacent to primer, K0385_Common.
The genetic_marker, MK002941 K0385, is located in gene, DCAR_012708.
The genetic_marker, MK002941 K0385, is located in gene, LOC108214499.
The marker_locus, K0385, is an instance of genetic_marker, MK002941 K0385.
Loading content
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70349 NG bin mapChr30K0385MapViewer
2016 Integ NG full mapCH379.904K0385MapViewer
2016 70349 NG full mapChr30K0385MapViewer
2016 Integ NG bin mapCH382.278K0385MapViewer
2014 70349Chromosome_30K0385MapViewer
Synonyms: 
  • MK002941
Sequence Coordinates: 
DCARv2_Chr3:50141074..50141118+
View location in JBrowse: 
Sequence: 
CCTTTATATCGACGAGCTTAAGGAGAGTATCAAGCTTRAAAGCCTGGGCA
TCACCACGATTTGTACCAACA
Sequences: 
>MK002941_K0385 ID=MK002941_K0385; Name=MK002941 K0385; organism=Daucus carota; type=genetic_marker
CCTTTATATCGACGAGCTTAAGGAGAGTATCAAGCTTRAAAGCCTGGGCA
TCACCACGATTTGTACCAACA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCTTTATATCGACGAGCTTAAGGAGAGTATCAAGCTT
Three Prime Flanking Region: 
AAAGCCTGGGCATCACCACGATTTGTACCAACA
SNP: 
A/G