Resource Type:
Genetic Marker
Name:
MK003112 K0556
Identifier:
MK003112_K0556
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK003112 K0556, is adjacent to primer, K0556_X. |
| The genetic_marker, MK003112 K0556, is adjacent to primer, K0556_Y. |
| The genetic_marker, MK003112 K0556, is adjacent to primer, K0556_Common. |
| The genetic_marker, MK003112 K0556, is located in gene, DCAR_012357. |
| The genetic_marker, MK003112 K0556, is located in gene, LOC108214665. |
| The marker_locus, K0556, is an instance of genetic_marker, MK003112 K0556. |
Synonyms:
- MK003112
Sequence Coordinates:
DCARv2_Chr3:46192404..46192462-
View location in JBrowse:
Sequence:
CGGAGAGATAATTTCTCGCGTAATTGAGCGGCTGCTCSAGCGCTTGTCGA
ACCGAAGATGAAATTAGAGTM
Sequences:
>MK003112_K0556 ID=MK003112_K0556; Name=MK003112 K0556; organism=Daucus carota; type=genetic_marker
CGGAGAGATAATTTCTCGCGTAATTGAGCGGCTGCTCSAGCGCTTGTCGA
ACCGAAGATGAAATTAGAGTM
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
CGGAGAGATAATTTCTCGCGTAATTGAGCGGCTGCTC
Three Prime Flanking Region:
AGCGCTTGTCGAACCGAAGATGAAATTAGAGTM
SNP:
C/G