Resource Type:
Genetic Marker
Name:
MK004117 K1561
Identifier:
MK004117_K1561
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK004117 K1561, is adjacent to primer, K1561_X. |
| The genetic_marker, MK004117 K1561, is adjacent to primer, K1561_Y. |
| The genetic_marker, MK004117 K1561, is adjacent to primer, K1561_Common. |
| The genetic_marker, MK004117 K1561, is located in gene, DCAR_012085. |
| The genetic_marker, MK004117 K1561, is located in gene, LOC108214817. |
| The marker_locus, K1561, is an instance of genetic_marker, MK004117 K1561. |
Synonyms:
- MK004117
Sequence Coordinates:
DCARv2_Chr3:43645415..43645464+
View location in JBrowse:
Sequence:
ATTTGTATCTGCTACACCCTGCAAACTCTCTTTTATAKTATTTACTCCAA
CAGAGCTGGGAGTCTTYCCGA
Sequences:
>MK004117_K1561 ID=MK004117_K1561; Name=MK004117 K1561; organism=Daucus carota; type=genetic_marker
ATTTGTATCTGCTACACCCTGCAAACTCTCTTTTATAKTATTTACTCCAA
CAGAGCTGGGAGTCTTYCCGA
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
ATTTGTATCTGCTACACCCTGCAAACTCTCTTTTATA
Three Prime Flanking Region:
TATTTACTCCAACAGAGCTGGGAGTCTTYCCGA
SNP:
G/T