Resource Type:
Genetic Marker
Name:
MK003536 K0980
Identifier:
MK003536_K0980
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK003536 K0980, is adjacent to primer, K0980_X. |
| The genetic_marker, MK003536 K0980, is adjacent to primer, K0980_Y. |
| The genetic_marker, MK003536 K0980, is adjacent to primer, K0980_Common. |
| The genetic_marker, MK003536 K0980, is adjacent to gene, DCAR_012055. |
| The genetic_marker, MK003536 K0980, is located in gene, LOC108213069. |
| The marker_locus, K0980, is an instance of genetic_marker, MK003536 K0980. |
Synonyms:
- MK003536
Sequence Coordinates:
DCARv2_Chr3:43339088..43339154-
View location in JBrowse:
Sequence:
TCGAGATCACATAAATTCTTCAAAAAATGGTCGGAGAYATAGAGAAGATG
ATCACAGTAGGCCTTGTTTGG
Sequences:
>MK003536_K0980 ID=MK003536_K0980; Name=MK003536 K0980; organism=Daucus carota; type=genetic_marker
TCGAGATCACATAAATTCTTCAAAAAATGGTCGGAGAYATAGAGAAGATG
ATCACAGTAGGCCTTGTTTGG
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
TCGAGATCACATAAATTCTTCAAAAAATGGTCGGAGA
Three Prime Flanking Region:
ATAGAGAAGATGATCACAGTAGGCCTTGTTTGG
SNP:
C/T