MK003403 K0847

Resource Type: 
Genetic Marker
Name: 
MK003403 K0847
Identifier: 
MK003403_K0847
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 4 relationships.
Relationships
The genetic_marker, MK003403 K0847, is adjacent to primer, K0847_X.
The genetic_marker, MK003403 K0847, is adjacent to primer, K0847_Y.
The genetic_marker, MK003403 K0847, is adjacent to primer, K0847_Common.
The marker_locus, K0847, is an instance of genetic_marker, MK003403 K0847.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70349 NG bin mapChr375.842K0847MapViewer
2016 Integ NG bin mapCH310.37K0847MapViewer
2016 Integ NG full mapCH39.805K0847MapViewer
2016 70349 NG full mapChr375.842K0847MapViewer
2014 70349Chromosome_375.842K0847MapViewer
Synonyms: 
  • MK003403
Sequence Coordinates: 
DCARv2_Chr3:3267433..3267503+
View location in JBrowse: 
Sequence: 
TGATGTTTGCTAAAATAGAAGGTTAAGGATTAACCTAWGAGGTGGAGCCT
AGTGATGTTTACCCTGTTCCT
Sequences: 
>MK003403_K0847 ID=MK003403_K0847; Name=MK003403 K0847; organism=Daucus carota; type=genetic_marker
TGATGTTTGCTAAAATAGAAGGTTAAGGATTAACCTAWGAGGTGGAGCCT
AGTGATGTTTACCCTGTTCCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGATGTTTGCTAAAATAGAAGGTTAAGGATTAACCTA
Three Prime Flanking Region: 
GAGGTGGAGCCTAGTGATGTTTACCCTGTTCCT
SNP: 
A/T