MK004916 K2360

Resource Type: 
Genetic Marker
Name: 
MK004916 K2360
Identifier: 
MK004916_K2360
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK004916 K2360, is adjacent to primer, K2360_X.
The genetic_marker, MK004916 K2360, is adjacent to primer, K2360_Y.
The genetic_marker, MK004916 K2360, is adjacent to primer, K2360_Common.
The genetic_marker, MK004916 K2360, is located in gene, LOC108214803.
The marker_locus, K2360, is an instance of genetic_marker, MK004916 K2360.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 70349Chromosome_383.17K2360MapViewer
2016 Integ NG full mapCH32.779K2360MapViewer
2016 70349 NG full mapChr383.17K2360MapViewer
Synonyms: 
  • MK004916
Sequence Coordinates: 
DCARv2_Chr3:1446755..1446811-
View location in JBrowse: 
Sequence: 
CAAGGTCTATGACTCTATGCCTTATCTTTACTACACAYTGCTGTTGTCTT
GCATATGGGGCACAAATTCTT
Sequences: 
>MK004916_K2360 ID=MK004916_K2360; Name=MK004916 K2360; organism=Daucus carota; type=genetic_marker
CAAGGTCTATGACTCTATGCCTTATCTTTACTACACAYTGCTGTTGTCTT
GCATATGGGGCACAAATTCTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CAAGGTCTATGACTCTATGCCTTATCTTTACTACACA
Three Prime Flanking Region: 
TGCTGTTGTCTTGCATATGGGGCACAAATTCTT
SNP: 
C/T