Resource Type:
Genetic Marker
Name:
MK005058 K2502
Identifier:
MK005058_K2502
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK005058 K2502, is adjacent to primer, K2502_X. |
| The genetic_marker, MK005058 K2502, is adjacent to primer, K2502_Y. |
| The genetic_marker, MK005058 K2502, is adjacent to primer, K2502_Common. |
| The genetic_marker, MK005058 K2502, is adjacent to gene, DCAR_026153. |
| The genetic_marker, MK005058 K2502, is located in gene, LOC108194121. |
| The marker_locus, K2502, is an instance of genetic_marker, MK005058 K2502. |
Synonyms:
- MK005058
Sequence Coordinates:
DCARv2_Chr7:33622611..33622698+
View location in JBrowse:
Sequence:
AAAATTATATRYAGTAGACTGCGCAGATGAATAAAATYTGATAATGTCGA
TGTACCAGATGATATGTAATR
Sequences:
>MK005058_K2502 ID=MK005058_K2502; Name=MK005058 K2502; organism=Daucus carota; type=genetic_marker
AAAATTATATRYAGTAGACTGCGCAGATGAATAAAATYTGATAATGTCGA
TGTACCAGATGATATGTAATR
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
AAAATTATATRYAGTAGACTGCGCAGATGAATAAAAT
Three Prime Flanking Region:
TGATAATGTCGATGTACCAGATGATATGTAATR
SNP:
C/T