Resource Type:
Genetic Marker
Name:
MK004250 K1694
Identifier:
MK004250_K1694
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
| Relationships |
|---|
| The genetic_marker, MK004250 K1694, is adjacent to primer, K1694_X. |
| The genetic_marker, MK004250 K1694, is adjacent to primer, K1694_Y. |
| The genetic_marker, MK004250 K1694, is adjacent to primer, K1694_Common. |
| The genetic_marker, MK004250 K1694, is located in gene, DCAR_026063. |
| The genetic_marker, MK004250 K1694, is located in gene, LOC108194137. |
| The marker_locus, K1694, is an instance of genetic_marker, MK004250 K1694. |
Synonyms:
- MK004250
Sequence Coordinates:
DCARv2_Chr7:32847430..32847476+
View location in JBrowse:
Sequence:
TGAGTGTCTCTCAGGAAACAGGCTTAAGCACTGAAGTRAACACTGAAATC
TCCTCAGTTGTGTCGAATCTC
Sequences:
>MK004250_K1694 ID=MK004250_K1694; Name=MK004250 K1694; organism=Daucus carota; type=genetic_marker
TGAGTGTCTCTCAGGAAACAGGCTTAAGCACTGAAGTRAACACTGAAATC
TCCTCAGTTGTGTCGAATCTC
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
TGAGTGTCTCTCAGGAAACAGGCTTAAGCACTGAAGT
Three Prime Flanking Region:
AACACTGAAATCTCCTCAGTTGTGTCGAATCTC
SNP:
A/G