Resource Type:
Genetic Marker
Name:
MK004672 K2116
Identifier:
MK004672_K2116
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
Relationships |
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The genetic_marker, MK004672 K2116, is adjacent to primer, K2116_X. |
The genetic_marker, MK004672 K2116, is adjacent to primer, K2116_Y. |
The genetic_marker, MK004672 K2116, is adjacent to primer, K2116_Common. |
The genetic_marker, MK004672 K2116, is located in gene, DCAR_026012. |
The genetic_marker, MK004672 K2116, is located in gene, LOC108196579. |
The marker_locus, K2116, is an instance of genetic_marker, MK004672 K2116. |

Synonyms:
- MK004672
Sequence Coordinates:
DCARv2_Chr7:32446441..32446493-
View location in JBrowse:
Sequence:
CATTTGGTGCTAAAGAATCATCTGTCTGCTCTTATCCYGCTGAAACAATA
ATTGCAGGTCCAGAAACTTCT
Sequences:
>MK004672_K2116 ID=MK004672_K2116; Name=MK004672 K2116; organism=Daucus carota; type=genetic_marker
CATTTGGTGCTAAAGAATCATCTGTCTGCTCTTATCCYGCTGAAACAATA
ATTGCAGGTCCAGAAACTTCT
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
CATTTGGTGCTAAAGAATCATCTGTCTGCTCTTATCC
Three Prime Flanking Region:
GCTGAAACAATAATTGCAGGTCCAGAAACTTCT
SNP:
C/T