MK004382 K1826

Resource Type: 
Genetic Marker
Name: 
MK004382 K1826
Identifier: 
MK004382_K1826
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 4 relationships.
Relationships
The genetic_marker, MK004382 K1826, is adjacent to primer, K1826_X.
The genetic_marker, MK004382 K1826, is adjacent to primer, K1826_Y.
The genetic_marker, MK004382 K1826, is adjacent to primer, K1826_Common.
The marker_locus, K1826, is an instance of genetic_marker, MK004382 K1826.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH749.082K1826MapViewer
2016 70349 NG full mapChr78.859K1826MapViewer
2014 70349Chromosome_78.859K1826MapViewer
Synonyms: 
  • MK004382
Sequence: 
CCTTTYACTTGCCCCTGCTTCTGCCAATAATGCCTAGRCTGCCATTTGCC
AGGTCGAAGTCTACATTWCAT
Sequences: 
>MK004382_K1826 ID=MK004382_K1826; Name=MK004382 K1826; organism=Daucus carota; type=genetic_marker
CCTTTYACTTGCCCCTGCTTCTGCCAATAATGCCTAGRCTGCCATTTGCC
AGGTCGAAGTCTACATTWCAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCTTTYACTTGCCCCTGCTTCTGCCAATAATGCCTAG
Three Prime Flanking Region: 
CTGCCATTTGCCAGGTCGAAGTCTACATTWCAT
SNP: 
A/G