MK003812 K1256

Resource Type: 
Genetic Marker
Name: 
MK003812 K1256
Identifier: 
MK003812_K1256
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003812 K1256, is adjacent to primer, K1256_X.
The genetic_marker, MK003812 K1256, is adjacent to primer, K1256_Y.
The genetic_marker, MK003812 K1256, is adjacent to primer, K1256_Common.
The genetic_marker, MK003812 K1256, is located in gene, DCAR_025582.
The genetic_marker, MK003812 K1256, is located in gene, LOC108196020.
The marker_locus, K1256, is an instance of genetic_marker, MK003812 K1256.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70349 NG full mapChr710.743K1256MapViewer
2016 Integ NG bin mapCH748.177K1256MapViewer
2016 70349 NG bin mapChr710.743K1256MapViewer
2014 70349Chromosome_710.743K1256MapViewer
2016 Integ NG full mapCH747.338K1256MapViewer
Synonyms: 
  • MK003812
Sequence Coordinates: 
DCARv2_Chr7:28426354..28426406-
View location in JBrowse: 
DCARv2_Chr7:28426354..28426406-
Sequence: 
AAAAGGAAATTTGTGTTAAATGACACTGATGCGTCTAYCGTGGGTAAGCT
TCCCTGCAGTATGGATGCTTC
Sequences: 
>MK003812_K1256 ID=MK003812_K1256; Name=MK003812 K1256; organism=Daucus carota; type=genetic_marker
AAAAGGAAATTTGTGTTAAATGACACTGATGCGTCTAYCGTGGGTAAGCT
TCCCTGCAGTATGGATGCTTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAAAGGAAATTTGTGTTAAATGACACTGATGCGTCTA
Three Prime Flanking Region: 
CGTGGGTAAGCTTCCCTGCAGTATGGATGCTTC
SNP: 
C/T