Resource Type:
Genetic Marker
Name:
MK004602 K2046
Identifier:
MK004602_K2046
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
Relationships |
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The genetic_marker, MK004602 K2046, is adjacent to primer, K2046_X. |
The genetic_marker, MK004602 K2046, is adjacent to primer, K2046_Y. |
The genetic_marker, MK004602 K2046, is adjacent to primer, K2046_Common. |
The genetic_marker, MK004602 K2046, is located in gene, DCAR_026805. |
The genetic_marker, MK004602 K2046, is located in gene, LOC108199317. |
The marker_locus, K2046, is an instance of genetic_marker, MK004602 K2046. |

MapViewer Marker Map Positions:
Map Name | Linkage Group | Position | Locus | MapViewer |
---|---|---|---|---|
2016 80592 NG full map | Chr8 | 9.22 | K2046 | MapViewer |
2016 70349 NG full map | Chr8 | 5.645 | K2046 | MapViewer |
2014 70349 | Chromosome_8 | 5.645 | K2046 | MapViewer |
2016 70796 NG full map | Chr8 | 8.866 | K2046 | MapViewer |
2016 Integ NG full map | CH8 | 57.668 | K2046 | MapViewer |
2016 Integ NG bin map | CH8 | 51.976 | K2046 | MapViewer |
2016 70796 NG bin map | Chr8 | 8.866 | K2046 | MapViewer |
Synonyms:
- MK004602
Sequence Coordinates:
DCARv2_Chr8:28549849..28549897+
View location in JBrowse:
Sequence:
CTGCAACATGATCAAGTCGAGGTGGAGGAACCACAGCRCTCTGACTGCCT
ACACCAGTAAATGCACCACAC
Sequences:
>MK004602_K2046 ID=MK004602_K2046; Name=MK004602 K2046; organism=Daucus carota; type=genetic_marker
CTGCAACATGATCAAGTCGAGGTGGAGGAACCACAGCRCTCTGACTGCCT
ACACCAGTAAATGCACCACAC
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
CTGCAACATGATCAAGTCGAGGTGGAGGAACCACAGC
Three Prime Flanking Region:
CTCTGACTGCCTACACCAGTAAATGCACCACAC
SNP:
A/G