MK004238 K1682

Resource Type: 
Genetic Marker
Name: 
MK004238 K1682
Identifier: 
MK004238_K1682
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004238 K1682, is adjacent to primer, K1682_X.
The genetic_marker, MK004238 K1682, is adjacent to primer, K1682_Y.
The genetic_marker, MK004238 K1682, is adjacent to primer, K1682_Common.
The genetic_marker, MK004238 K1682, is located in gene, DCAR_029685.
The genetic_marker, MK004238 K1682, is located in gene, LOC108202975.
The marker_locus, K1682, is an instance of genetic_marker, MK004238 K1682.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr917.868K1682MapViewer
2016 70349 NG bin mapChr921.335K1682MapViewer
2016 Integ NG full mapCH916.782K1682MapViewer
2014 70349Chromosome_921.335K1682MapViewer
2016 70796 NG bin mapChr917.868K1682MapViewer
2016 Integ NG bin mapCH918.555K1682MapViewer
2016 70349 NG full mapChr921.335K1682MapViewer
Synonyms: 
  • MK004238
Sequence Coordinates: 
DCARv2_Chr9:10759745..10759791+
View location in JBrowse: 
Sequence: 
GATCTTGGAAGGCCTTTTGATCCCACCAGCGTTGTCCYTGAGTGGCACAG
AACTTGGCATTCACTGACGAC
Sequences: 
>MK004238_K1682 ID=MK004238_K1682; Name=MK004238 K1682; organism=Daucus carota; type=genetic_marker
GATCTTGGAAGGCCTTTTGATCCCACCAGCGTTGTCCYTGAGTGGCACAG
AACTTGGCATTCACTGACGAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GATCTTGGAAGGCCTTTTGATCCCACCAGCGTTGTCC
Three Prime Flanking Region: 
TGAGTGGCACAGAACTTGGCATTCACTGACGAC
SNP: 
C/T