MK005090 K2534

Resource Type: 
Genetic Marker
Name: 
MK005090 K2534
Identifier: 
MK005090_K2534
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK005090 K2534, is adjacent to primer, K2534_X.
The genetic_marker, MK005090 K2534, is adjacent to primer, K2534_Y.
The genetic_marker, MK005090 K2534, is adjacent to primer, K2534_Common.
The genetic_marker, MK005090 K2534, is located in gene, LOC108201930.
The marker_locus, K2534, is an instance of genetic_marker, MK005090 K2534.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 70349Chromosome_939.293K2534MapViewer
2016 Integ NG bin mapCH933.419K2534MapViewer
2016 Integ NG full mapCH929.884K2534MapViewer
2016 70349 NG full mapChr939.293K2534MapViewer
2016 70796 NG full mapChr931.972K2534MapViewer
2016 70349 NG bin mapChr939.293K2534MapViewer
Synonyms: 
  • MK005090
Sequence Coordinates: 
DCARv2_Chr9:18786135..18786186+
View location in JBrowse: 
Sequence: 
CGAATATGTGTGTTGATTGATGTGTGTGTGATGTTTTRATTGAGGGGTTT
AAGTGAAGATGACCTAATGGA
Sequences: 
>MK005090_K2534 ID=MK005090_K2534; Name=MK005090 K2534; organism=Daucus carota; type=genetic_marker
CGAATATGTGTGTTGATTGATGTGTGTGTGATGTTTTRATTGAGGGGTTT
AAGTGAAGATGACCTAATGGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CGAATATGTGTGTTGATTGATGTGTGTGTGATGTTTT
Three Prime Flanking Region: 
ATTGAGGGGTTTAAGTGAAGATGACCTAATGGA
SNP: 
A/G