Resource Type:
Genetic Marker
Name:
MK005090 K2534
Identifier:
MK005090_K2534
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship:
Relationships |
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The genetic_marker, MK005090 K2534, is adjacent to primer, K2534_X. |
The genetic_marker, MK005090 K2534, is adjacent to primer, K2534_Y. |
The genetic_marker, MK005090 K2534, is adjacent to primer, K2534_Common. |
The genetic_marker, MK005090 K2534, is located in gene, LOC108201930. |
The marker_locus, K2534, is an instance of genetic_marker, MK005090 K2534. |

MapViewer Marker Map Positions:
Map Name | Linkage Group | Position | Locus | MapViewer |
---|---|---|---|---|
2014 70349 | Chromosome_9 | 39.293 | K2534 | MapViewer |
2016 Integ NG bin map | CH9 | 33.419 | K2534 | MapViewer |
2016 Integ NG full map | CH9 | 29.884 | K2534 | MapViewer |
2016 70349 NG full map | Chr9 | 39.293 | K2534 | MapViewer |
2016 70796 NG full map | Chr9 | 31.972 | K2534 | MapViewer |
2016 70349 NG bin map | Chr9 | 39.293 | K2534 | MapViewer |
Synonyms:
- MK005090
Sequence Coordinates:
DCARv2_Chr9:18786135..18786186+
View location in JBrowse:
Sequence:
CGAATATGTGTGTTGATTGATGTGTGTGTGATGTTTTRATTGAGGGGTTT
AAGTGAAGATGACCTAATGGA
Sequences:
>MK005090_K2534 ID=MK005090_K2534; Name=MK005090 K2534; organism=Daucus carota; type=genetic_marker
CGAATATGTGTGTTGATTGATGTGTGTGTGATGTTTTRATTGAGGGGTTT
AAGTGAAGATGACCTAATGGA
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
CGAATATGTGTGTTGATTGATGTGTGTGTGATGTTTT
Three Prime Flanking Region:
ATTGAGGGGTTTAAGTGAAGATGACCTAATGGA
SNP:
A/G