MK006062 K3506

Resource Type: 
Genetic Marker
Name: 
MK006062 K3506
Identifier: 
MK006062_K3506
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006062 K3506, is adjacent to primer, K3506_X.
The genetic_marker, MK006062 K3506, is adjacent to primer, K3506_Y.
The genetic_marker, MK006062 K3506, is adjacent to primer, K3506_Common.
The genetic_marker, MK006062 K3506, is located in gene, DCAR_030665.
The genetic_marker, MK006062 K3506, is adjacent to gene, LOC108201810.
The marker_locus, K3506, is an instance of genetic_marker, MK006062 K3506.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70349 NG bin mapChr947.499K3506MapViewer
2016 70796 NG full mapChr947.291K3506MapViewer
2016 Integ NG full mapCH940.391K3506MapViewer
2016 70796 NG bin mapChr947.291K3506MapViewer
2014 70349Chromosome_947.499K3506MapViewer
2016 80592 NG full mapChr937.384K3506MapViewer
2016 70349 NG full mapChr947.499K3506MapViewer
2016 Integ NG bin mapCH943.702K3506MapViewer
Synonyms: 
  • MK006062
Sequence Coordinates: 
DCARv2_Chr9:28678726..28682655+
View location in JBrowse: 
Sequence: 
CCTGGCCAAGAGTACCCCTGATAGTATATGACAGTATYAGAAAACAAGCA
ATGCCTCACAATGGTTTTATT
Sequences: 
>MK006062_K3506 ID=MK006062_K3506; Name=MK006062 K3506; organism=Daucus carota; type=genetic_marker
CCTGGCCAAGAGTACCCCTGATAGTATATGACAGTATYAGAAAACAAGCA
ATGCCTCACAATGGTTTTATT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCTGGCCAAGAGTACCCCTGATAGTATATGACAGTAT
Three Prime Flanking Region: 
AGAAAACAAGCAATGCCTCACAATGGTTTTATT
SNP: 
C/T