MK002672 K0116

Resource Type: 
Genetic Marker
Name: 
MK002672 K0116
Identifier: 
MK002672_K0116
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002672 K0116, is adjacent to primer, K0116_X.
The genetic_marker, MK002672 K0116, is adjacent to primer, K0116_Y.
The genetic_marker, MK002672 K0116, is adjacent to primer, K0116_Common.
The genetic_marker, MK002672 K0116, is located in gene, DCAR_029800.
The genetic_marker, MK002672 K0116, is located in gene, LOC108202597.
The marker_locus, K0116, is an instance of genetic_marker, MK002672 K0116.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr929.674K0116MapViewer
2016 Integ NG bin mapCH928.965K0116MapViewer
2016 Integ NG full mapCH926.955K0116MapViewer
2016 70796 NG full mapChr929.674K0116MapViewer
Synonyms: 
  • MK002672
Sequence Coordinates: 
DCARv2_Chr9:16998561..16998621-
View location in JBrowse: 
DCARv2_Chr9:16998561..16998621-
Sequence: 
ATAGATCAAGTAACCTTATTGGCTTAAACTTTGCTCCRCCAACTTGAAGT
TTTTCCTGAGTAACTAAAGTT
Sequences: 
>MK002672_K0116 ID=MK002672_K0116; Name=MK002672 K0116; organism=Daucus carota; type=genetic_marker
ATAGATCAAGTAACCTTATTGGCTTAAACTTTGCTCCRCCAACTTGAAGT
TTTTCCTGAGTAACTAAAGTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATAGATCAAGTAACCTTATTGGCTTAAACTTTGCTCC
Three Prime Flanking Region: 
CCAACTTGAAGTTTTTCCTGAGTAACTAAAGTT
SNP: 
A/G